Clone BO34177 Report

Search the DGRC for BO34177

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG15459-RA
Protein status:BO34177.pep: Imported from assembly
Sequenced Size:940

Clone Sequence Records

BO34177.complete Sequence

940 bp assembled on 2013-05-14

GenBank Submission: KX797617

> BO34177.complete
GAAGTTATCAGTCGACATGGCCGACGGCTTTAAGAAGTACTTCAATGGGA
CAACCATCAATGGACGCGCTAACGTGGCAAAGGCCACATACGCCACGTTG
GCCCTGTTGTTCATCGTGTACAAGCTGCGCCGCGGATCCGGCAAGACCGG
CGAGTTGGCCAGCGGCAAGTGCAGCTGCGAATCGGACCACGAGTCGTCCC
TCAATGGCGACATTGGCGTCTACGGCGCGGATCCCGACTGCTCCGTTTGC
CGGGAGCGATCGGAGCGGGCCATGACCGAGTTCGATCGCGAGCAGCAGCG
CCGGGCGGCGGGCGAGGATGACAATGGTTGTCGCGACGATCCGCCGCCGC
CACCACCTCCGCCCACATCGGGAGGATCAGGCTCTGCTCCGCGGCGCAAG
TGTCCCTGCGAGGAGCCGCAGCGTCGGGCGGAGGGAGCCGTGAAGCATAG
CAGCCACAGCAGCTGGGCGCGAGGCCAGCAGATTCAGCCGCCAAACCAGT
ACCAACAGTATAAACAGCCCGAGGCGGAGCAAGTGCGTCCGGCTAGCCAA
GTGATGGGTCAGGTGCACGACGCCTTCTACAGGGTGCTGCGAGGAGTCGT
GGGAGCCGTTTTGGGCAATGCGGCGGTCAACACCAGCGGCACCGCTTCCG
ATTCCCCAGCTCAGGCAGCCGCAGTGGAAGTCTCGCGGGATGAGCTGGAC
GAGGATGAACGTGACGACGGCCAGGACGATGAGACGCCGTTAAAGCGCCG
CACGGCACCGCGCTCTTGCGTGCCCACAGGCAGCCAAGAGAACGCCTCGG
GACAGCCGGAGGAACTGGGCCGGGAACAGGCCGACGACCAGCCGCAGGCG
GAGGAGCAGGCGGAGTACAGCGCGTTCAGCGATGGCTTCACTTCCGGCCT
GTCCTTTACCAGCGATGAAAAGGCAAGCTTTCTAGACCAT

BO34177.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:35:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15459-RA 909 CG15459-PA 1..906 17..922 4530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:35:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15459-RA 1072 CG15459-RA 85..990 17..922 4530 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:35:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20412423..20413271 922..74 4245 100 Minus
X 23542271 X 20413439..20413497 75..17 295 100 Minus
Blast to na_te.dros performed 2014-11-28 13:35:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6813..6884 449..518 139 68.1 Plus

BO34177.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:41 Download gff for BO34177.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 112..1017 17..924 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:23 Download gff for BO34177.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 85..990 17..924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:30 Download gff for BO34177.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 85..990 17..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:30 Download gff for BO34177.complete
Subject Subject Range Query Range Percent Splice Strand
X 20412421..20413271 74..924 99 <- Minus
X 20413441..20413497 17..73 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:23 Download gff for BO34177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20283448..20284298 74..924 99 <- Minus
arm_X 20284468..20284524 17..73 100   Minus

BO34177.pep Sequence

Translation from 16 to 940

> BO34177.pep
MADGFKKYFNGTTINGRANVAKATYATLALLFIVYKLRRGSGKTGELASG
KCSCESDHESSLNGDIGVYGADPDCSVCRERSERAMTEFDREQQRRAAGE
DDNGCRDDPPPPPPPPTSGGSGSAPRRKCPCEEPQRRAEGAVKHSSHSSW
ARGQQIQPPNQYQQYKQPEAEQVRPASQVMGQVHDAFYRVLRGVVGAVLG
NAAVNTSGTASDSPAQAAAVEVSRDELDEDERDDGQDDETPLKRRTAPRS
CVPTGSQENASGQPEELGREQADDQPQAEEQAEYSAFSDGFTSGLSFTSD
EKASFLDH

BO34177.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15459-PA 302 CG15459-PA 1..302 1..302 1596 100 Plus