BO34177.complete Sequence
940 bp assembled on 2013-05-14
GenBank Submission: KX797617
> BO34177.complete
GAAGTTATCAGTCGACATGGCCGACGGCTTTAAGAAGTACTTCAATGGGA
CAACCATCAATGGACGCGCTAACGTGGCAAAGGCCACATACGCCACGTTG
GCCCTGTTGTTCATCGTGTACAAGCTGCGCCGCGGATCCGGCAAGACCGG
CGAGTTGGCCAGCGGCAAGTGCAGCTGCGAATCGGACCACGAGTCGTCCC
TCAATGGCGACATTGGCGTCTACGGCGCGGATCCCGACTGCTCCGTTTGC
CGGGAGCGATCGGAGCGGGCCATGACCGAGTTCGATCGCGAGCAGCAGCG
CCGGGCGGCGGGCGAGGATGACAATGGTTGTCGCGACGATCCGCCGCCGC
CACCACCTCCGCCCACATCGGGAGGATCAGGCTCTGCTCCGCGGCGCAAG
TGTCCCTGCGAGGAGCCGCAGCGTCGGGCGGAGGGAGCCGTGAAGCATAG
CAGCCACAGCAGCTGGGCGCGAGGCCAGCAGATTCAGCCGCCAAACCAGT
ACCAACAGTATAAACAGCCCGAGGCGGAGCAAGTGCGTCCGGCTAGCCAA
GTGATGGGTCAGGTGCACGACGCCTTCTACAGGGTGCTGCGAGGAGTCGT
GGGAGCCGTTTTGGGCAATGCGGCGGTCAACACCAGCGGCACCGCTTCCG
ATTCCCCAGCTCAGGCAGCCGCAGTGGAAGTCTCGCGGGATGAGCTGGAC
GAGGATGAACGTGACGACGGCCAGGACGATGAGACGCCGTTAAAGCGCCG
CACGGCACCGCGCTCTTGCGTGCCCACAGGCAGCCAAGAGAACGCCTCGG
GACAGCCGGAGGAACTGGGCCGGGAACAGGCCGACGACCAGCCGCAGGCG
GAGGAGCAGGCGGAGTACAGCGCGTTCAGCGATGGCTTCACTTCCGGCCT
GTCCTTTACCAGCGATGAAAAGGCAAGCTTTCTAGACCAT
BO34177.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:35:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15459-RA | 909 | CG15459-PA | 1..906 | 17..922 | 4530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:35:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15459-RA | 1072 | CG15459-RA | 85..990 | 17..922 | 4530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:35:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20412423..20413271 | 922..74 | 4245 | 100 | Minus |
X | 23542271 | X | 20413439..20413497 | 75..17 | 295 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 13:35:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6813..6884 | 449..518 | 139 | 68.1 | Plus |
BO34177.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:50:41 Download gff for
BO34177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15459-RA | 112..1017 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:23 Download gff for
BO34177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15459-RA | 85..990 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:30 Download gff for
BO34177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15459-RA | 85..990 | 17..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:30 Download gff for
BO34177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20412421..20413271 | 74..924 | 99 | <- | Minus |
X | 20413441..20413497 | 17..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:23 Download gff for
BO34177.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20283448..20284298 | 74..924 | 99 | <- | Minus |
arm_X | 20284468..20284524 | 17..73 | 100 | | Minus |
BO34177.pep Sequence
Translation from 16 to 940
> BO34177.pep
MADGFKKYFNGTTINGRANVAKATYATLALLFIVYKLRRGSGKTGELASG
KCSCESDHESSLNGDIGVYGADPDCSVCRERSERAMTEFDREQQRRAAGE
DDNGCRDDPPPPPPPPTSGGSGSAPRRKCPCEEPQRRAEGAVKHSSHSSW
ARGQQIQPPNQYQQYKQPEAEQVRPASQVMGQVHDAFYRVLRGVVGAVLG
NAAVNTSGTASDSPAQAAAVEVSRDELDEDERDDGQDDETPLKRRTAPRS
CVPTGSQENASGQPEELGREQADDQPQAEEQAEYSAFSDGFTSGLSFTSD
EKASFLDH
BO34177.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15459-PA | 302 | CG15459-PA | 1..302 | 1..302 | 1596 | 100 | Plus |