Clone BO34182 Report

Search the DGRC for BO34182

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:341
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG4712-RB
Protein status:BO34182.pep: Imported from assembly
Sequenced Size:2056

Clone Sequence Records

BO34182.complete Sequence

2056 bp assembled on 2013-09-16

GenBank Submission: KX794782

> BO34182.complete
GAAGTTATCAGTCGACATGGAAACGGAGAATAATGAAGAACCTCAGATTG
ATTTGTTGGAGGAAAACGAAGCGGTACGAAGCTTGGCTGATGAAGTTCTC
TCGAGATTTTCAGGCGATAGTAAAAAGTCTGTTTCGGTGAATATTTCAAT
GGTTTCTATGTCATCAAATGAAAACAGTGAAGAAAGACTGAAAATCATTA
GAAAGGAGGAAAGAAAATTGGCAATAAAGGACATCATGAATCGACTAAAG
GAGCGTGACGCGGAGGAGATGAAAATGAAGAAGTCCGGCGAACAGGAGGG
GGACCAAAGGGAAGACGAAATGGCCAGCAAGTCACAAGACAGTATTCAAC
GGCACATGTCCATTTCACAAGTGGAGGAGCAGGACGATGAAACATTGCTG
TGGACCAAGCTGGGTGAGGATATCGACAGTGACAACAGAAGAACCACGGA
TATTGCTCCCGCAGCAGACACTTTGGACGCAGTTAATGCCGAGGACGAAG
ACATGCTCGATCTCATCGAAACCCCATCGGAATCTGATTCAGAAGCACCA
GTGACCGAGAGGTCCAAGAGCATAGATCCCATGAAAGTGGCCGTTAAATC
TTTAATGCTGGTGCCCAGTCTGTCGGATATTTCGCTGCCAAGTGCGCCGC
CCACGTCAAGAAAGTCTTCCCATTCTATTAAATCGAACAGATCATTAATT
TTTAAAAGTTCCCCAACCGATGGCAATTCAAGCTTCGATACCGAAGAGTC
GGAAGAAGAATCCACCATTGGCCCCATTGATCCGCGTACTCCAATGGATC
AATTGTACGACTCACTATCGATTTGCGAGTCTTTGGCACCCATAAAAGAC
GAATTTTCAAGAACAACAGCTTTGGAAAAAGAAAGAAATGATTACATGGG
CTTTGAACAGTTGTTTACAGTAACAACGGAACACCTTGAAACGGACGAAA
TCGATGTGGCAGCCCAACTGAGGACTATAGAGACAAGCCAGGTTATTTCT
GAATTTATAAACCATTTGATACATAAGGTAGTCATGCCAGAGCATCGGGG
TACTGAGGAATATATTCGGGTGCGACTGGACAAAGAAAAGCTGCTGGTCG
CTCTGCAGAATGAGGTGCATGATTACACAAGTGTAAGGGATCATAACAAA
CAGCTGGAGGAGCGAATGGTAGATTACTTCCGACGCACGAAAAACTTCCG
ATACTTTGACCGCCTAACGCCGAACGCCGAGTCAACCTACTCCCGTCGCC
TTGATCACGCCCTGACCTATCTGTCCTATGGTCAAGAGCGCCTCATCAGG
GTAAGGGAGAAATATGGCATTCTAATGACCACTGCGTTTTTGGACCTCGC
CAACGCCATGAACATCGTTCTCAGCACGGAGCATCATCTCGAGCAGACGT
TAAAACGCATCCTGGTTCGTCCGGACGCCGAGACCGATTTCCTCAAGCGC
CTGGTTGCCCGCGAACTCCGACTTATGGCCGACCATCGGAATCAAATTAG
CGATGCCCGGCTGTTGCTCATGTCGCAGAAACACACCTTGGCCCGCATCT
TAGAAAAAATAAGAGATGTAGAAACGGTTTGCGACGGTGTGAGCTTGAAT
GACTTTATTTCCGTGCAAAACAAAACGATCGGCCTAGAAAAGAAGATTGA
AGAGCGAAATATTGAATTAAAAAGACAGCGCAGGCTCTACCACACCGAAC
TGCATATGACTAAGCACAATCGAGAGAAGTCCCACGAGCTTAAGAACAAA
ATTCACGTTCTTAAAGATAACCTGCTGGAAAAGCACAAGTTGAAAAATAA
ACTAAAATCCGAGCTGTGTCGCCGAAAACTGGAGCACAAGGCTATTAGGC
GCCGGATGAGAGATTTGACATGCCAGGGTGGTATCCTGGCTATGCCCGCA
TTGATGTATGACTACGATCGAACTGTCGCCTATGTTCGTGAAAAGGAGAA
AATGGTCTCGAGTCTCCGGGAAACCCTAAAATCACTTACCAATCAGCTGC
AAAGTTTGATGTCACCTCGAAAAAAGAGCTCGATTATTGCAAGCTTTCTA
GACCAT

BO34182.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG4712-RB 2025 CG4712-PB 1..2022 17..2038 10110 100 Plus
CG4712-RA 1944 CG4712-PA 104..1941 201..2038 9190 100 Plus
CG4712-RA 1944 CG4712-PA 1..104 33..136 520 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:45:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG4712-RB 2251 CG4712-RB 178..2199 17..2038 10110 100 Plus
CG4712-RA 2186 CG4712-RA 297..2134 201..2038 9190 100 Plus
CG4712-RA 2186 CG4712-RA 178..297 17..136 600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13250009..13251547 1555..17 7695 100 Minus
2R 25286936 2R 13248946..13249333 2038..1651 1940 100 Minus
2R 25286936 2R 13249401..13249497 1652..1556 485 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:45:21 has no hits.

BO34182.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:25 Download gff for BO34182.complete
Subject Subject Range Query Range Percent Splice Strand
CG4712-RB 163..2184 17..2040 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:24 Download gff for BO34182.complete
Subject Subject Range Query Range Percent Splice Strand
CG4712-RB 178..2199 17..2040 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:24 Download gff for BO34182.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13248944..13249331 1653..2040 99 <- Minus
2R 13249401..13249497 1556..1652 100 <- Minus
2R 13250009..13251547 17..1555 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:25 Download gff for BO34182.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9136449..9136836 1653..2040 99 <- Minus
arm_2R 9136906..9137002 1556..1652 100 <- Minus
arm_2R 9137514..9139052 17..1555 100   Minus

BO34182.pep Sequence

Translation from 16 to 2056

> BO34182.pep
METENNEEPQIDLLEENEAVRSLADEVLSRFSGDSKKSVSVNISMVSMSS
NENSEERLKIIRKEERKLAIKDIMNRLKERDAEEMKMKKSGEQEGDQRED
EMASKSQDSIQRHMSISQVEEQDDETLLWTKLGEDIDSDNRRTTDIAPAA
DTLDAVNAEDEDMLDLIETPSESDSEAPVTERSKSIDPMKVAVKSLMLVP
SLSDISLPSAPPTSRKSSHSIKSNRSLIFKSSPTDGNSSFDTEESEEEST
IGPIDPRTPMDQLYDSLSICESLAPIKDEFSRTTALEKERNDYMGFEQLF
TVTTEHLETDEIDVAAQLRTIETSQVISEFINHLIHKVVMPEHRGTEEYI
RVRLDKEKLLVALQNEVHDYTSVRDHNKQLEERMVDYFRRTKNFRYFDRL
TPNAESTYSRRLDHALTYLSYGQERLIRVREKYGILMTTAFLDLANAMNI
VLSTEHHLEQTLKRILVRPDAETDFLKRLVARELRLMADHRNQISDARLL
LMSQKHTLARILEKIRDVETVCDGVSLNDFISVQNKTIGLEKKIEERNIE
LKRQRRLYHTELHMTKHNREKSHELKNKIHVLKDNLLEKHKLKNKLKSEL
CRRKLEHKAIRRRMRDLTCQGGILAMPALMYDYDRTVAYVREKEKMVSSL
RETLKSLTNQLQSLMSPRKKSSIIASFLDH

BO34182.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG4712-PB 674 CG4712-PB 1..674 1..674 3379 100 Plus
CG4712-PA 647 CG4712-PA 33..647 60..674 3090 99.7 Plus
CG4714-PA 732 CG4714-PA 104..724 49..661 715 32.2 Plus
CG31231-PA 679 CG31231-PA 51..678 28..678 431 25 Plus
CG31784-PC 763 CG31784-PC 212..728 134..664 319 25.4 Plus