BO34186.complete Sequence
1594 bp assembled on 2013-09-16
GenBank Submission: KX795007
> BO34186.complete
GAAGTTATCAGTCGACATGACGGCCATCAAACATGTGGCCATCTCCTGTC
GCCGAGCATTGACCAAATGTGCAAAAATTGGCCACACTACAGTGTCCGTG
AGTCGGTCCCTCCGGAAACTGTCACCCACGGCGTTCAAGACACTTCGACA
AGCAATCGCCAAGGTGGGGCACTTAAACATCATGGGTCAGAAGATACGAC
TGAACGATCGGGAATTAGCGGCCAACAAAGTGATCATGGCCGTCAAGAAG
GAAGAGATATCCAAGGGCATACTGGATCCCAGTCAGTTCACGCCGGGCCA
GCACATCTTTAAGACCCTGGCCGAGGTGCAAAAGTCGCCGATCTTTAACC
TGATTAAGGGGATGCCAAAGGGCGGCGCGCTTCATGCCCACGATACGGCG
CTCTGCAGCACAGACTACCTCATAAGTCTGACCTACCGAAAGAATCTTTG
GATTTGTACCGCTGAGGAGGGCTGCAAGGCCATTGCTTTTCGGTTTTCCA
AGGAGGAGCCCAAGGAAAAACCTGTTAAGGAATCTATCTGGGAGCCAATG
GAGGAGTTCCGTGAACGGCGAGGAGAGGAGAATGTTACAAAATATCTCAC
ACGTCGATTCAGCATGTACCCCTTCTCCAAGTTCATCTCAAACAATCAAG
CCTGGGCACACTTCATGGGCATCTTTATTTTGCTCGACGGTTTGCTCTGC
CATGCCCCCATTTGGGCTGAGTACTACTACAATGCCCTCAAGGAGTTTGC
CGAGGACGGAGTTCAATATCTAGAACTGCGATCCCTGCTCCCGCCACTCT
ACTGTATCGATGGCGATATGCTGACCATTCGGGACACAGTGGCCATTTAC
AATTCGGAGCTGGAACGCTTTCGAGCCGATCATCCAGATTTTATTGGCTC
CAAACTGATATACGCTCCTCTCAGAGGAGTGGAGCCCAGTGTGGTCGAGC
AATATGTGAAAACAGCTGTCGAACTTAATAAAGAATTTCCTAACTTCATG
GTTGGCTTTGATCTAGTTGGCCAAGAGGAGTTGGGACGACCGCTGATTGA
TTTTGTGGAGCCCCTGCTAAAAATGCCCGAGCACATTAATTTTTATTTCC
ATGCGGGGGAGACGAACTGGTTCGGATCTCCCATCGATGAGAACCTGGTG
GACGCCATCCTGTTGGGCACGAAACGCATCGGCCATGGATACGCCATTAC
CAAGCATCCTATGATGATGCGACTGGCCAAACTATTGGGCATAGCCATCG
AGGTGTGTCCGGTGTCAAATCAAGTGCTGCAACTGGGCGTGGACTATCGG
AATCATCCGGCGGCACTGCTGTTGGCCGCCAATGTCCCCATTGTTATCTC
CTCAGACGATCCATCCTTCTGGCACTGTGCTCCGCTGTCCCACGACTTCT
ACTTCGCCTTCCTGGGCATTGCACCGATGAAGGCGGACCTGAGGTTCCTC
AAAAGCCTGGCCATCAACTCCATCCGGTACAGTGCCCTGGTTGGCGAGGA
AAAGCGAGTGGGGTACCGAAAGTGGCAGGAGAAGTGGGACAAGTGGATCG
ACGACGTGGTGGAGCACAAGTACTGTGCAAGCTTTCTAGACCAT
BO34186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-B-RA | 1563 | CG5998-PA | 1..1560 | 17..1576 | 7650 | 99.4 | Plus |
| Adgf-E-RA | 1620 | CG10143-PA | 991..1472 | 971..1452 | 505 | 73.7 | Plus |
| Adgf-A-RB | 1662 | CG5992-PB | 423..475 | 361..413 | 190 | 90.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:45:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-B-RA | 1694 | CG5998-RA | 96..1655 | 17..1576 | 7650 | 99.4 | Plus |
| Adgf-E-RA | 1791 | CG10143-RA | 1081..1562 | 971..1452 | 505 | 73.7 | Plus |
| Adgf-A-RB | 2584 | CG5992-RB | 623..675 | 361..413 | 190 | 90.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17749531..17750493 | 979..17 | 4665 | 99 | Minus |
| 3L | 28110227 | 3L | 17748872..17749468 | 1576..980 | 2985 | 100 | Minus |
| 2R | 25286936 | 2R | 14657027..14657499 | 1452..980 | 475 | 73.4 | Minus |
| 3L | 28110227 | 3L | 17753844..17753896 | 413..361 | 190 | 90.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:45:26 has no hits.
BO34186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:27 Download gff for
BO34186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adgf-B-RA | 96..1655 | 17..1578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:25 Download gff for
BO34186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adgf-B-RA | 96..1655 | 17..1578 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:25 Download gff for
BO34186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17748870..17749468 | 980..1578 | 99 | <- | Minus |
| 3L | 17749531..17750493 | 17..979 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:27 Download gff for
BO34186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17741970..17742568 | 980..1578 | 99 | <- | Minus |
| arm_3L | 17742631..17743593 | 17..979 | 98 | | Minus |
BO34186.pep Sequence
Translation from 16 to 1594
> BO34186.pep
MTAIKHVAISCRRALTKCAKIGHTTVSVSRSLRKLSPTAFKTLRQAIAKV
GHLNIMGQKIRLNDRELAANKVIMAVKKEEISKGILDPSQFTPGQHIFKT
LAEVQKSPIFNLIKGMPKGGALHAHDTALCSTDYLISLTYRKNLWICTAE
EGCKAIAFRFSKEEPKEKPVKESIWEPMEEFRERRGEENVTKYLTRRFSM
YPFSKFISNNQAWAHFMGIFILLDGLLCHAPIWAEYYYNALKEFAEDGVQ
YLELRSLLPPLYCIDGDMLTIRDTVAIYNSELERFRADHPDFIGSKLIYA
PLRGVEPSVVEQYVKTAVELNKEFPNFMVGFDLVGQEELGRPLIDFVEPL
LKMPEHINFYFHAGETNWFGSPIDENLVDAILLGTKRIGHGYAITKHPMM
MRLAKLLGIAIEVCPVSNQVLQLGVDYRNHPAALLLAANVPIVISSDDPS
FWHCAPLSHDFYFAFLGIAPMKADLRFLKSLAINSIRYSALVGEEKRVGY
RKWQEKWDKWIDDVVEHKYCASFLDH
BO34186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:39:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-B-PA | 520 | CG5998-PA | 1..520 | 1..520 | 2743 | 100 | Plus |
| Adgf-E-PA | 539 | CG10143-PA | 43..530 | 31..518 | 1619 | 59.2 | Plus |
| Adgf-A-PB | 553 | CG5992-PB | 62..538 | 36..514 | 1363 | 52.6 | Plus |
| Adgf-A-PA | 553 | CG5992-PA | 62..538 | 36..514 | 1363 | 52.6 | Plus |
| Adgf-D-PA | 502 | CG9621-PA | 27..502 | 40..519 | 866 | 38.8 | Plus |
