BO34187.complete Sequence
1918 bp assembled on 2013-09-16
GenBank Submission: KX798291
> BO34187.complete
GAAGTTATCAGTCGACATGTCGAGCGATGAACTGTATCGCGTAAAGTACT
CTAGTTCGCGCTATCAGCGCCAGCACACGCCCTTGAACGCCAGCTCCTTG
CATTGGCAGCGCCAGCAATACGGTCATGAGCTGGACGAGATGCTCCGGCG
ACGTCTGCTGGCATCGCCGGCCTACGTGGACAGGCTGGAGCAGGAGGCAG
TGCTCGTCGGTCACGAGGGCTGCGTCAACTGTCTGGAGTGGACCACTGAT
GGTATGTGGCTGGCCTCCGGATCCGACGACTATCGTGTGATGATCTGGGA
TCCGTTCCGAAAGAAGCTTGTTCATGTCATCAGGACCAAGCATCTGGGCA
ATGTGTTCTCTGTAAAATTTCTGCCCAAGACCAACAACAGCATTGTGGCT
ACGTGTGCAGCGGATAAGTTCATCTACGTCTACGACATCAACGACCCGAA
CGAGACCCTTTTTTCTTGCATTTGCCATTTTTCTCGGGCGAAGCGCTTGG
CCACCGCCCAGGACTCGCCGCACGTCTTTTGGTCGGCGGGAGAGGATGGT
TGCATCCTGCAGCTAGATATACGTGAGCCACATCGCTGCCGTCCCGAGGA
AGGTATTGGTGTCAGGCTCTTGAACCTGCACGATCAGTTGGAGAACACAG
AGGCCAAATGTCTGGCTATAAATCCCCGAAGGACGGAATACCTGGCCGTG
GGCACCAACGATCCCTTTGCCCGGGTGTACGATCGCCGCAAGCTGCCCTC
CACCAACGGCAATGGTCTCTCTGCCTGCGTGGCGTACTATGCACCCGGAC
AGATCGTGAAAAACATCAGCCGGAACATTGTCCACGAACCACGGGGAATC
ACTTATCTTACGTTCAATGGCAATGGCACAGAGCTTCTGGTCAACATAGG
CTGCGAGCACGTCTACCGCTTTGATCTGAATCACGCTGAGCCTCCGGTTT
TCTACGATCTGCCCGCCTTCACATCAACACTCGTTCATGAGGAGGAGCCG
GTGAAGATGCCACACAGAAGTCGCTCGCTGCCAACCGAAATAGAGGTGTA
TAAGAAGGAGGGCAATGACTTTCTTGAGAACGGCAAACTTGTGGATGCAA
TTGATGCTTACTCAGCGGCTTTGGCGAAATATCCACAAGGAGAGGTCCTC
TATCTGAACAGAGCGACGGCTCTAATGCGACGCGGCTGGTTTGGTGATAT
ATATGCGGCACTTAGGGACTGCCACGAGGCCCTGCGTCTGGATCCCAGTT
ATGTCAAGGCCCACTTTCGGCTGGCCAGGGCATTGCTTGAGCTGCATCGA
CCCCAGGATGCGGATCAGTGCTTGCAGGCACTCATTCAGCGTTTCCCCGA
CTTCGCCAACAATCACGGCGTGCTCATGCTGAACAAGGACATCAAGGAGA
ATCGACGACAGTCAAAGAGCCCCGAGGCACCCGAGCTACAGCCGGTGGAA
GTGGATGATGGCTTCCGCTACCTGCGTCTGAAGAACGCCGAATATGATCT
CCGTTCCACGGCACGCGACTATATGCAACGCTATGTGGGCCACTGCAACG
TCACGACGGACATAAAGGAGGCCAACTATTTGGGCAGCCAGGGCGAGTTC
ATAGCCGCTGGTTCGGATGACGGCAACATGTACATTTGGGAGGGAGACAC
GGGCAAGATACGCGCCGTTTATCGGGCGGACAGTGCCATCGTGAATTGCG
TGCAGCCGCATCCGAGCATCTGCATGCTGGCCACCAGTGGCATTGACCAT
AACATTAAGATCTGGTCGCCGTGCGCCGCCAGCGCCGAGGAGCGACCCAA
TCTCGTGGCGGATGTGACGCGTTTCGTTGAGGATAACCAGGAGAAGATGC
GCCTCGATCCATTCGAACTGCACACGCGCAATGCGTACTGTTTCAATAAT
GCAAGCTTTCTAGACCAT
BO34187.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:45:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| adp-RB | 1887 | CG5124-PB | 1..1884 | 17..1900 | 9330 | 99.7 | Plus |
| adp-RA | 1887 | CG5124-PA | 1..1884 | 17..1900 | 9330 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:45:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| adp-RB | 2241 | CG5124-RB | 141..2024 | 17..1900 | 9330 | 99.7 | Plus |
| adp-RA | 2291 | CG5124-RA | 191..2074 | 17..1900 | 9330 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:45:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18152707..18153843 | 764..1900 | 5595 | 99.5 | Plus |
| 2R | 25286936 | 2R | 18151894..18152643 | 17..766 | 3750 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:45:29 has no hits.
BO34187.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:29 Download gff for
BO34187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| adp-RA | 191..2074 | 17..1902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:27 Download gff for
BO34187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| adp-RA | 191..2074 | 17..1902 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:27 Download gff for
BO34187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18151894..18152641 | 17..764 | 100 | -> | Plus |
| 2R | 18152708..18153843 | 765..1902 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:29 Download gff for
BO34187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14039399..14040146 | 17..764 | 100 | -> | Plus |
| arm_2R | 14040213..14041348 | 765..1902 | 99 | | Plus |
BO34187.pep Sequence
Translation from 16 to 1918
> BO34187.pep
MSSDELYRVKYSSSRYQRQHTPLNASSLHWQRQQYGHELDEMLRRRLLAS
PAYVDRLEQEAVLVGHEGCVNCLEWTTDGMWLASGSDDYRVMIWDPFRKK
LVHVIRTKHLGNVFSVKFLPKTNNSIVATCAADKFIYVYDINDPNETLFS
CICHFSRAKRLATAQDSPHVFWSAGEDGCILQLDIREPHRCRPEEGIGVR
LLNLHDQLENTEAKCLAINPRRTEYLAVGTNDPFARVYDRRKLPSTNGNG
LSACVAYYAPGQIVKNISRNIVHEPRGITYLTFNGNGTELLVNIGCEHVY
RFDLNHAEPPVFYDLPAFTSTLVHEEEPVKMPHRSRSLPTEIEVYKKEGN
DFLENGKLVDAIDAYSAALAKYPQGEVLYLNRATALMRRGWFGDIYAALR
DCHEALRLDPSYVKAHFRLARALLELHRPQDADQCLQALIQRFPDFANNH
GVLMLNKDIKENRRQSKSPEAPELQPVEVDDGFRYLRLKNAEYDLRSTAR
DYMQRYVGHCNVTTDIKEANYLGSQGEFIAAGSDDGNMYIWEGDTGKIRA
VYRADSAIVNCVQPHPSICMLATSGIDHNIKIWSPCAASAEERPNLVADV
TRFVEDNQEKMRLDPFELHTRNAYCFNNASFLDH
BO34187.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:39:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| adp-PB | 628 | CG5124-PB | 1..628 | 1..628 | 3365 | 100 | Plus |
| adp-PA | 628 | CG5124-PA | 1..628 | 1..628 | 3365 | 100 | Plus |
| CG8001-PD | 743 | CG8001-PD | 539..632 | 493..585 | 208 | 43.2 | Plus |
| CG8001-PB | 743 | CG8001-PB | 539..632 | 493..585 | 208 | 43.2 | Plus |
| CG8001-PC | 748 | CG8001-PC | 544..637 | 493..585 | 208 | 43.2 | Plus |
| CG8001-PD | 743 | CG8001-PD | 266..540 | 7..303 | 200 | 24.1 | Plus |
| CG8001-PB | 743 | CG8001-PB | 266..540 | 7..303 | 200 | 24.1 | Plus |
