BO34192.complete Sequence
2239 bp assembled on 2013-09-16
GenBank Submission: KX799640
> BO34192.complete
GAAGTTATCAGTCGACATGGAGGCCCTAATTCCGGTCATAAACAAGCTGC
AGGACGTCTTCAACACCGTGGGCTCCGACTCCATCCAATTGCCCCAAATT
GTTGTTCTAGGCAGTCAGAGCTCCGGCAAGAGTTCGGTGATCGAGAGCGT
TGTGGGACGATCCTTTCTGCCCCGTGGAACTGGTATTGTGACCCGTCGCC
CACTGGTGCTCCAGCTGATCTACAGCCCACTCGATGATCGCGAGAATCGC
TCGGCGGAAAATGGTACGTCCAATGCCGAGGAGTGGGGCCGCTTCCTGCA
CACCAAGAAGTGCTTCACGGACTTTGACGAGATCCGCAAGGAGATCGAAA
ACGAAACGGAGCGGGCGGCGGGCAGCAACAAGGGCATCTGCCCGGAGCCC
ATCAACCTGAAGATATTCTCGACGCACGTGGTCAACCTAACGCTAGTGGA
TCTGCCCGGCATCACCAAGGTCCCGGTGGGCGATCAGCCGGAGGATATCG
AGGCGCAGATCAAAGAATTGGTCCTCAAGTACATTGAGAACCCGAACTCC
ATCATTTTGGCTGTGACGGCCGCCAACACGGACATGGCCACCAGTGAGGC
ACTCAAGCTGGCCAAGGACGTGGACCCCGATGGCCGGCGCACTCTGGCCG
TGGTCACGAAACTGGATCTCATGGATGCCGGCACCGATGCCATTGACATC
CTGTGCGGCCGGGTCATTCCCGTTAAGCTGGGCATCATCGGCGTGATGAA
TCGCTCGCAGAAGGACATCATGGACCAAAAGCACATCGACGATCAGATGA
AGGACGAGGCCGCCTTCCTGCAGCGCAAGTATCCCACTCTGGCCACCCGG
AACGGCACGCCCTACTTGGCCAAGACCCTCAACCGGCTCCTGATGCACCA
CATCCGGGACTGCCTGCCAGATCTTAAGACTCGCGTCAACATCATGGCCA
CGCAATTCCAATCGCTGCTAAACTCCTATGGCGAGGATGTCTCCGACAAG
AGCCAGACCCTGCTGCAGATCATCACGAAGTTCTCCAGCGCCTACTGCTG
CACAATCGAGGGCACGGCCAGGAATATCGAGACCACGGAACTGTGCGGCG
GTGCCCGGATGGGCTACATTTTCCACGAGACCTTCGGCCGCACCCTGGAC
TCCATTCACCCGCTGGCGGGTCTGAGCAAGATGGACATACTGACAGCCAT
CCGGAATGCCACTGGTCCACGCCCGGCTTTGTTCGTTCCGGAGGTCTCGT
TCGAACTGCTAGTGAAGCGCCAGATTCGCCGCCTGGAGGAACCCTCCTTG
CGCTGCGTGGAACTCATTCACGAGGAGATGCAGCGCATTGTTCAGCATTG
TGGCAACGAAGTGCAGCAGGAGATGCTGCGCTTCCCCAAACTGCACGAGA
AGATTGTGGACGTGGTCACCCAGCTGCTGCGTCGCCGTCTGCCGCACACC
AACGTGATGGTGGAGAACATTGTGGCCATCGAGCTGGCCTACATCAACAC
CAAGCACCCCGACTTCCACAAGGATGCCGCTTTGGTGCCCAGTCTGCTGA
AAACGGACAGCGATCCCTACTCACAGATAAATCTGGGCCAGCGGCGGGCC
AATACACCGCGCAACCACATGTCGCCTCAGATTTCGTCGCACAGTGCTGG
TTCACAGCAGCCGCAGCAGCAGCAGCCGCCGCAGCCGAATTCCTCACAGC
AGCAATATAGCCAAGTGCATGAGCAGAATCACGTCGCCGAGAACTCGACG
CCTTCGATGGCGAGCACATGGCTGTCGAACATTTTACCGCCGGCACCAAC
GCGTCCGGACAGCATTGAGAACTCGACCAACAACACTCCGGTTCACAATA
ACATCGTGAGTCCAGTGAAGCCGGTCAATCTGCTGCCCGATGTGCCGGCC
AACCACAATCCACGTCGCCTCACTGACAAGGAGCAGAAGGATTGCGATGT
CATCGAACACCTGATCAAATCGTATTTCTACATTGTGCGCAAATCCATAC
AAGACTCGGTTCCAAAGGCCATCATGCATTTCTTGGTTAACTACGTTAAG
GACAACTTGCAGAGCGAATTGGTTACACATCTGTATAAGTCGGATAAGGC
TGAAACCCTGCTCAACGAGTCCGATCACATTGCAGTGCGCCGAAAAGAGG
CGGCCGATATGCTGAAGGCACTGACGCGGGCGAATCACATCATCAGCGAA
ATCCGCGAGACCCACATGTGGGCAAGCTTTCTAGACCAT
BO34192.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drp1-RB | 2208 | CG3210-PB | 1..2205 | 17..2221 | 10785 | 99.3 | Plus |
| Drp1-RA | 2208 | CG3210-PA | 1..2205 | 17..2221 | 10785 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drp1-RB | 2868 | CG3210-RB | 160..2364 | 17..2221 | 10785 | 99.3 | Plus |
| Drp1-RA | 2711 | CG3210-RA | 160..2364 | 17..2221 | 10785 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2583534..2584199 | 928..263 | 3255 | 99.2 | Minus |
| 2L | 23513712 | 2L | 2582867..2583320 | 1380..927 | 2255 | 99.8 | Minus |
| 2L | 23513712 | 2L | 2582466..2582812 | 1726..1380 | 1660 | 98.6 | Minus |
| 2L | 23513712 | 2L | 2582174..2582404 | 1955..1725 | 1110 | 98.7 | Minus |
| 2L | 23513712 | 2L | 2581897..2582110 | 2168..1955 | 1055 | 99.5 | Minus |
| 2L | 23513712 | 2L | 2584255..2584404 | 265..116 | 750 | 100 | Minus |
| 2L | 23513712 | 2L | 2585170..2585271 | 118..17 | 510 | 100 | Minus |
| 2L | 23513712 | 2L | 2581785..2581840 | 2221..2166 | 265 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:46:29 has no hits.
BO34192.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:55 Download gff for
BO34192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drp1-RA | 160..2364 | 17..2223 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:49 Download gff for
BO34192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drp1-RA | 160..2364 | 17..2223 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:49 Download gff for
BO34192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2581783..2581838 | 2168..2223 | 94 | <- | Minus |
| 2L | 2581898..2582109 | 1956..2167 | 99 | <- | Minus |
| 2L | 2582174..2582402 | 1727..1955 | 98 | <- | Minus |
| 2L | 2582466..2582811 | 1381..1726 | 98 | <- | Minus |
| 2L | 2582867..2583318 | 929..1380 | 99 | <- | Minus |
| 2L | 2583534..2584198 | 264..928 | 99 | <- | Minus |
| 2L | 2584257..2584401 | 119..263 | 100 | <- | Minus |
| 2L | 2585170..2585271 | 17..118 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:55 Download gff for
BO34192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2581783..2581838 | 2168..2223 | 94 | <- | Minus |
| arm_2L | 2581898..2582109 | 1956..2167 | 99 | <- | Minus |
| arm_2L | 2582174..2582402 | 1727..1955 | 98 | <- | Minus |
| arm_2L | 2582466..2582811 | 1381..1726 | 98 | <- | Minus |
| arm_2L | 2582867..2583318 | 929..1380 | 99 | <- | Minus |
| arm_2L | 2583534..2584198 | 264..928 | 99 | <- | Minus |
| arm_2L | 2584257..2584401 | 119..263 | 100 | <- | Minus |
| arm_2L | 2585170..2585271 | 17..118 | 100 | | Minus |
BO34192.pep Sequence
Translation from 16 to 2239
> BO34192.pep
MEALIPVINKLQDVFNTVGSDSIQLPQIVVLGSQSSGKSSVIESVVGRSF
LPRGTGIVTRRPLVLQLIYSPLDDRENRSAENGTSNAEEWGRFLHTKKCF
TDFDEIRKEIENETERAAGSNKGICPEPINLKIFSTHVVNLTLVDLPGIT
KVPVGDQPEDIEAQIKELVLKYIENPNSIILAVTAANTDMATSEALKLAK
DVDPDGRRTLAVVTKLDLMDAGTDAIDILCGRVIPVKLGIIGVMNRSQKD
IMDQKHIDDQMKDEAAFLQRKYPTLATRNGTPYLAKTLNRLLMHHIRDCL
PDLKTRVNIMATQFQSLLNSYGEDVSDKSQTLLQIITKFSSAYCCTIEGT
ARNIETTELCGGARMGYIFHETFGRTLDSIHPLAGLSKMDILTAIRNATG
PRPALFVPEVSFELLVKRQIRRLEEPSLRCVELIHEEMQRIVQHCGNEVQ
QEMLRFPKLHEKIVDVVTQLLRRRLPHTNVMVENIVAIELAYINTKHPDF
HKDAALVPSLLKTDSDPYSQINLGQRRANTPRNHMSPQISSHSAGSQQPQ
QQQPPQPNSSQQQYSQVHEQNHVAENSTPSMASTWLSNILPPAPTRPDSI
ENSTNNTPVHNNIVSPVKPVNLLPDVPANHNPRRLTDKEQKDCDVIEHLI
KSYFYIVRKSIQDSVPKAIMHFLVNYVKDNLQSELVTHLYKSDKAETLLN
ESDHIAVRRKEAADMLKALTRANHIISEIRETHMWASFLDH
BO34192.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drp1-PB | 735 | CG3210-PB | 1..735 | 1..735 | 3780 | 100 | Plus |
| Drp1-PA | 735 | CG3210-PA | 1..735 | 1..735 | 3780 | 100 | Plus |
| shi-PE | 830 | CG18102-PE | 1..489 | 1..500 | 1081 | 46.4 | Plus |
| shi-PA | 830 | CG18102-PA | 1..489 | 1..500 | 1081 | 46.4 | Plus |
| shi-PC | 830 | CG18102-PC | 1..489 | 1..500 | 1081 | 46.4 | Plus |
| shi-PE | 830 | CG18102-PE | 647..736 | 640..729 | 161 | 37.8 | Plus |
| shi-PA | 830 | CG18102-PA | 647..736 | 640..729 | 161 | 37.8 | Plus |
