BO34209.complete Sequence
835 bp assembled on 2013-05-14
GenBank Submission: KX793859
> BO34209.complete
GAAGTTATCAGTCGACATGACAACCAGTCCCAACGTAGCAGAAGTGGATG
ATGGCGAGCTGCCGAAACTGGAAGCGATAATCAGCGCGCTGAAATGCGAG
CAGACGGGTCACATTATGGAGGCGATACTGCTCTACGAGGAGAGCATCTT
CAAGTTGTCCCAGATGGCCGATGCGGAGCCGAGTCGCCGCCAGCTGTGTG
GGAAGTATTTGAAGATGTACGAGGCGCGGGCCAAACAGCTGAGGGATCAG
GTCAAGGGTCACTTGCACACCAGCCGTATGCTGGATCACATCACCATCGA
GCAGGGTGCCAGGGGCAGAAGCTACCAGCGGCTGTTTGGTCCGTATTTGG
ACGATGCGGTTCGGGAGGCCCATCTCAACGAGCCACACCTCACGGAGCCA
CCACACTTTAGGAATTTGCTTAATTTTTTCGAGGTGCTGGTCAAGAACTG
TCGCTATCTAAAGTATATTCGCCTCACTACGCGCCCAGATGCGACGGCGC
CCAAGAATCAGTTGCAGATGCTGCAGCAAATGCAGAGCGATCTGGCCGGT
GGCAACATCCAGATGAATTTCCAGATGGACGACAGTTTGCACGATCGCAA
GATCGTTCTTAGCTCGGGAGTGGTCATTAAGATTGGCCGTGGCCTTCACT
ACTTCGAGCCCATGGAGGGTTCGTACAGTTTGGGTCTGTGCGATTTCGAT
TTTCGCAAGTGCCTGGCCACCGAGGTGGACATCTGGAAGTGTCGTCCTTT
TGCGAGGCGCCTTAAGGATACACAGGAGGGCGAGGATCGACCGGAGGCAC
ACGGCTACTCCAGCGATGCAAGCTTTCTAGACCAT
BO34209.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:36:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30398-RA | 804 | CG30398-PA | 1..801 | 17..817 | 3945 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:36:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30398-RA | 1029 | CG30398-RA | 128..928 | 17..817 | 3945 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:36:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21717931..21718731 | 17..817 | 3945 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:36:35 has no hits.
BO34209.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-14 17:51:04 Download gff for
BO34209.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30398-RA | 99..899 | 17..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:57 Download gff for
BO34209.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30398-RA | 99..899 | 17..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:30:59 Download gff for
BO34209.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30398-RA | 128..928 | 17..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:30:59 Download gff for
BO34209.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21717931..21718731 | 17..819 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:57 Download gff for
BO34209.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17605436..17606236 | 17..819 | 99 | | Plus |
BO34209.pep Sequence
Translation from 16 to 835
> BO34209.pep
MTTSPNVAEVDDGELPKLEAIISALKCEQTGHIMEAILLYEESIFKLSQM
ADAEPSRRQLCGKYLKMYEARAKQLRDQVKGHLHTSRMLDHITIEQGARG
RSYQRLFGPYLDDAVREAHLNEPHLTEPPHFRNLLNFFEVLVKNCRYLKY
IRLTTRPDATAPKNQLQMLQQMQSDLAGGNIQMNFQMDDSLHDRKIVLSS
GVVIKIGRGLHYFEPMEGSYSLGLCDFDFRKCLATEVDIWKCRPFARRLK
DTQEGEDRPEAHGYSSDASFLDH
BO34209.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:14:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30398-PA | 267 | CG30398-PA | 1..267 | 1..267 | 1406 | 100 | Plus |
CG14985-PB | 241 | CG14985-PB | 9..235 | 19..241 | 470 | 41.4 | Plus |
CG14985-PC | 190 | CG14985-PC | 9..190 | 19..196 | 315 | 37.4 | Plus |