Clone BO34293 Report

Search the DGRC for BO34293

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:342
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptCG33322-RA
Protein status:BO34293.pep: Imported from assembly
Sequenced Size:1489

Clone Sequence Records

BO34293.complete Sequence

1489 bp assembled on 2013-05-22

GenBank Submission: KX798477

> BO34293.complete
GAAGTTATCAGTCGACATGAACAGAAAACACAATAAGATATCTCATAGCG
GGTCCCACATGCACGGTATCAAGGTGGAACCCAAAAAGTACTCGCCCCAG
GAGTACAGGGAGAAAATTCTTAGCCTGTTTCCGCTTCCGCCGAGACCGGC
AAATATGTGCCACGATGCGTTCGTGAAGAAACTTCTGGAGCCCTATGTCC
TAGAGACCAAAGAGGTGGTCCGAGCCGTAAAGATGACCCGTGATTCCACC
GGGGAAGACTCTAGTGAGGATACATACGAGGCGTTCCGGGCAAAGATGTA
CAAAACGAACTACACGGCACGGGCCACCGTATACATGGCACGGGCCACCA
TTTTAGCCAGGACCAGTGTCAAGTCAATCCTTAGTCCCGAGCAACGAGAT
TCGGCAGCCCAAACGACCCAAATGTTCAAGGTGCGCTTTGCAAACCTAAT
ATCCGACTTTCGGAACGTGTGCATCATCTACCAGCTGCTGCAGCTGCAAG
AAATCCTCAATGTGATGCGGGAGTATCCGCCAGCTGGCACCAATCCCAAC
GACACCATCTTCGGTTGGTCCTACAAGGAGAATCTAAAGCGTTTTGAACA
GCAACCGAGCACCGTCTATGTGGACATTCTGGAGAAGAACAAGCCGGAGG
CGACGCTTGACGACCTTAAGTTTTATGTGGATTTGGGAGAGCTAATCGGT
CTCGTGCAGGCCCTCCTAGACGATGTGATCCACGACAGGGATCTCTGTGC
GCCCAACGGCTTCATGGAGCTTCTTAAGGACACACAAGTTGATATCGACA
AGCTGATAGCTCTGCCCTACGAGACCATAATGGCCGAACACGATTCCTTA
CTTGAGGAGAAGGAGAAAAAGAATCGGGTGGGAAAGTTTCACAATCCGAA
ACTAACGGCCAAGCAGCACGCACTCAACAAGGAACGATTCCAGATCGACT
ACATGAGCCCGATCGAATCGCGCTATAAAGTGAATTGGACCCACGATGTT
GTGGACCAGGGTCAATACATTGATTTCCTACGCTGCAAGGTCCTTTCCGA
CGAGCTAGAAAAGATTGAAGAGCTCATGAGAACGGACTCGAGTGTGTGGA
GGAGCTGCCATTTGGAGTACGTCACACTGATCGAACAGTACAAGCAGCGC
ATCAATAAGATTCAACAAGATTACGACGACGATATGGAGACGGCCGAGAA
TAAGTTGCAGGCGACTCTTAACAGGGTGGGCAAGTGCAAGGAAGACCTGA
GGTCCTGCCAGGAAAAAGTTGAGGAGTTCCATGTGAAAATAGAAGAGGTG
CGAGAAAAGATTGCGAAGGAAGTGGAAAAGGAGCGTGCCCGTTTGTCAGC
TGCACGAGTTTCTAAACGAATGTCCCGGATATTGGCAAGACAGAAGGAGG
AGAAGAAGGCTGCCGCACAGCAGGCAAAACTGGACAAAAAGCTGGCCAGA
CAAAACAAAAAATCTCAAGAAGCAAGCTTTCTAGACCAT

BO34293.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG33322-RA 1458 CG33322-PA 1..1455 17..1471 7230 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:43:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG33322-RA 1599 CG33322-RA 65..1519 17..1471 7230 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:43:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20815415..20816176 778..17 3795 99.9 Minus
2L 23513712 2L 20814606..20814920 1352..1038 1545 99.4 Minus
2L 23513712 2L 20815138..20815310 950..778 865 100 Minus
2L 23513712 2L 20814417..20814536 1471..1352 600 100 Minus
2L 23513712 2L 20814984..20815074 1041..951 455 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:43:18 has no hits.

BO34293.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 11:52:23 Download gff for BO34293.complete
Subject Subject Range Query Range Percent Splice Strand
CG33322-RA 65..1519 17..1473 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:05 Download gff for BO34293.complete
Subject Subject Range Query Range Percent Splice Strand
CG33322-RA 65..1519 17..1473 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:31 Download gff for BO34293.complete
Subject Subject Range Query Range Percent Splice Strand
CG33322-RA 65..1519 17..1473 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:31 Download gff for BO34293.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20814415..20814536 1352..1473 98 <- Minus
2L 20814607..20814918 1040..1351 99 <- Minus
2L 20814986..20815074 951..1039 100 <- Minus
2L 20815138..20815310 778..950 100 <- Minus
2L 20815416..20816176 17..777 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:05 Download gff for BO34293.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20814415..20814536 1352..1473 98 <- Minus
arm_2L 20814607..20814918 1040..1351 99 <- Minus
arm_2L 20814986..20815074 951..1039 100 <- Minus
arm_2L 20815138..20815310 778..950 100 <- Minus
arm_2L 20815416..20816176 17..777 99   Minus

BO34293.pep Sequence

Translation from 16 to 1489

> BO34293.pep
MNRKHNKISHSGSHMHGIKVEPKKYSPQEYREKILSLFPLPPRPANMCHD
AFVKKLLEPYVLETKEVVRAVKMTRDSTGEDSSEDTYEAFRAKMYKTNYT
ARATVYMARATILARTSVKSILSPEQRDSAAQTTQMFKVRFANLISDFRN
VCIIYQLLQLQEILNVMREYPPAGTNPNDTIFGWSYKENLKRFEQQPSTV
YVDILEKNKPEATLDDLKFYVDLGELIGLVQALLDDVIHDRDLCAPNGFM
ELLKDTQVDIDKLIALPYETIMAEHDSLLEEKEKKNRVGKFHNPKLTAKQ
HALNKERFQIDYMSPIESRYKVNWTHDVVDQGQYIDFLRCKVLSDELEKI
EELMRTDSSVWRSCHLEYVTLIEQYKQRINKIQQDYDDDMETAENKLQAT
LNRVGKCKEDLRSCQEKVEEFHVKIEEVREKIAKEVEKERARLSAARVSK
RMSRILARQKEEKKAAAQQAKLDKKLARQNKKSQEASFLDH

BO34293.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG33322-PA 485 CG33322-PA 1..485 1..485 2495 100 Plus
Mst36Fb-PB 470 CG42626-PB 29..467 38..486 262 24.8 Plus
Mst36Fa-PC 498 CG31801-PC 3..458 5..485 224 23.6 Plus