Clone BO34294 Report

Search the DGRC for BO34294

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:342
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG15128-RA
Protein status:BO34294.pep: Imported from assembly
Sequenced Size:1774

Clone Sequence Records

BO34294.complete Sequence

1774 bp assembled on 2013-09-16

GenBank Submission: KX798056

> BO34294.complete
GAAGTTATCAGTCGACATGACGTCGATTGTGGAGATGCCAAGGGCAAATT
TAGAGGAGGCCTTGCCACCATGGATGAAGATAGACTGGTCGGACGAGGTG
CTCCACGACATTTACAGGGACTGGGGAACCTACTATTCCCGCCGCCGTCG
GGAGAACTTCGCATTGCACTATCTAAACAAGGCACTCGCATTGGAGCCAA
CGGATCACATGACCCTCTACAAACGATGCCAGAGCAAGAGGAAGGCTGCC
CAGATGCTGGGTGCGCTGGATGACAGCCGGGCAGCTGCCAAGCTAGCACG
CAGTAAGGATGGCGAGGAAAAGGCCATAATCAATCTCGATATTTGTGATG
TACTCTACGAACTAAACCAGTTCGAAAACAGCAAGGCTGAGATGCACAAT
AATATGCGAGTGTTTATTGGTAATAAAAGAAAGAGCTTCGAGCAGCGCCA
GTTGGTGGTGGATGGTGTGATCAAAGATGTGACTGGTGAGGCCATGTCAG
CATTCTTTACCAAGAATTTGAAGACCGTCAGCATTGTTCACGATTTGATC
AAGGAAAGGGAAAGGGTCGATAATCGACCCTTGTGGAAGAGACTGAAGGA
GCAGGGCAAGTGCGATGTGCAGAGTATTCCAGAGGTTCCTGAGGAGATGC
TCTCGCCCATGGAGATTGCTCGCCGGAAGCGTGCCTTTAACATCTTCCAC
CAGAGTTACATCAACGACTCCTGGATCGATGTGCTCTTCATGAAGATGCT
GTGCAAGAATCCAAACCTTTTGCTACCCCAGTGCAAGGAGTCCTCATACT
TCCTTCAGCAGCTTTCTAGCAAGCAATACGAGATTGTTCGCAAGTTTATG
AAAATGCTGCAGTCCCGCTCCCCACTTTACCTGGTCAATTATCTGAAATA
CGGCAATAAAGCCATGTCGGATAAATACCGTGAGGCTTACCTGTTCCGCG
TACAATATCAGACACATCGTAACATGAACCATGCTCTGAAGGAGATTAGG
GCACTCCGCAAGGCCAAGAAGGTTCAGCAATTGGCGAAATTCGTCGAGGA
GCTAATGGGCACATATGTGGTCCTGAAGACGGCCCGTGTGATGTGTTGGA
AATTTGAGTTCCTTAACGAGGTGTACAACACAATGGCTTTGACTTTGGCC
GAACAGCTTCGAGTGCCCAAAGGCTTTACGCCCTATGGTAGTAATGCTAT
ACTAAAGCTGCTTCGTCTGCCAGTGGAAAGGGTCAAGGATTTTGTTCCCG
TGACATTTGGGGACCGAGCACCAGAGCCGGAGGGCAACGATCCAGCAACT
ACAAGGGCCAAGAGGCTAACTGCGCGCCTGGAACATCGAATGGTCTTTGC
CAAGTATTCAATCGAAAAGTGTTATTTGTTGCACCAGATTTCGCAATCTT
ATTTGGACCAAGGGCGTCATTCAGAGTGCACTTACAATGCTCGCAAGGCA
ATTAAAGAGAGCAAGAACTGCAATAGCAATCTGTGGAAGTTCCTCAGTGT
GGTTCAGATAGTCAAGGCCAATGCCATTCTGCACAAGCTGGAACAGACCA
AGGAAGCCCTAGAAGATGCTCTGCCCATTGCCCATTTTCTGAAATCTTCA
GAGTTGATTCTCTTCATAGAGAACTGCATGGCATGCAACACGGAGGATTC
GATCAACAAGCGGGCCACCCTAATGCAGGCTCGCCGCGTGAGCAAGTCCG
AATCTGTTGCCACCCACTCGCTGGTCAGCGGCCAGGATGTCGACTCCCAA
GGTGGTGCAAGCTTTCTAGACCAT

BO34294.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15128-RA 1743 CG15128-PA 1..1740 17..1756 8670 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:46:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15128-RA 2011 CG15128-RA 197..1936 17..1756 8670 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:46:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19686889..19687282 850..457 1970 100 Minus
2R 25286936 2R 19685689..19685989 1756..1456 1475 99.3 Minus
2R 25286936 2R 19686274..19686560 1312..1026 1435 100 Minus
2R 25286936 2R 19687609..19687882 290..17 1370 100 Minus
2R 25286936 2R 19686646..19686823 1027..850 890 100 Minus
2R 25286936 2R 19687370..19687538 459..291 845 100 Minus
2R 25286936 2R 19686068..19686213 1457..1312 730 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:46:34 has no hits.

BO34294.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:48:57 Download gff for BO34294.complete
Subject Subject Range Query Range Percent Splice Strand
CG15128-RA 197..1936 17..1758 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:34:51 Download gff for BO34294.complete
Subject Subject Range Query Range Percent Splice Strand
CG15128-RA 197..1936 17..1758 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:34:51 Download gff for BO34294.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19687609..19687882 17..290 100   Minus
2R 19687372..19687538 291..457 100 <- Minus
2R 19685687..19685987 1458..1758 98 <- Minus
2R 19686068..19686213 1312..1457 100 <- Minus
2R 19686275..19686558 1028..1311 100 <- Minus
2R 19686646..19686822 851..1027 100 <- Minus
2R 19686889..19687281 458..850 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:48:57 Download gff for BO34294.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15573780..15574063 1028..1311 100 <- Minus
arm_2R 15573192..15573492 1458..1758 98 <- Minus
arm_2R 15573573..15573718 1312..1457 100 <- Minus
arm_2R 15574151..15574327 851..1027 100 <- Minus
arm_2R 15574394..15574786 458..850 100 <- Minus
arm_2R 15574877..15575043 291..457 100 <- Minus
arm_2R 15575114..15575387 17..290 100   Minus

BO34294.pep Sequence

Translation from 16 to 1774

> BO34294.pep
MTSIVEMPRANLEEALPPWMKIDWSDEVLHDIYRDWGTYYSRRRRENFAL
HYLNKALALEPTDHMTLYKRCQSKRKAAQMLGALDDSRAAAKLARSKDGE
EKAIINLDICDVLYELNQFENSKAEMHNNMRVFIGNKRKSFEQRQLVVDG
VIKDVTGEAMSAFFTKNLKTVSIVHDLIKERERVDNRPLWKRLKEQGKCD
VQSIPEVPEEMLSPMEIARRKRAFNIFHQSYINDSWIDVLFMKMLCKNPN
LLLPQCKESSYFLQQLSSKQYEIVRKFMKMLQSRSPLYLVNYLKYGNKAM
SDKYREAYLFRVQYQTHRNMNHALKEIRALRKAKKVQQLAKFVEELMGTY
VVLKTARVMCWKFEFLNEVYNTMALTLAEQLRVPKGFTPYGSNAILKLLR
LPVERVKDFVPVTFGDRAPEPEGNDPATTRAKRLTARLEHRMVFAKYSIE
KCYLLHQISQSYLDQGRHSECTYNARKAIKESKNCNSNLWKFLSVVQIVK
ANAILHKLEQTKEALEDALPIAHFLKSSELILFIENCMACNTEDSINKRA
TLMQARRVSKSESVATHSLVSGQDVDSQGGASFLDH

BO34294.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:40:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG15128-PA 580 CG15128-PA 1..580 1..580 3000 100 Plus
CG7634-PA 579 CG7634-PA 1..569 1..564 1462 51 Plus
r-cup-PA 594 CG10998-PA 9..561 8..558 959 38.9 Plus
wa-cup-PB 580 CG10113-PB 11..548 5..549 884 36.8 Plus
p-cup-PA 538 CG12993-PA 61..532 110..573 617 31.4 Plus