BO34301.complete Sequence
319 bp assembled on 2013-09-16
GenBank Submission: KX795542
> BO34301.complete
GAAGTTATCAGTCGACATGAAGTTCTTCATCGCCGCCTTCCTGATCGCCG
CCTGCATGGCCCTCGCCCAGTGCAGTGTCATCTACTCGCCGGTGTCCTCC
GTTCCGGTGGTCCGTTCCGTGCCCGTTATTCGCTCCGTTCCGGTGGTGCG
CAGTGTGCCTGTGGTCCGCCGTGTGCCGGTGGTTCGCCGTGTCAATGTGG
TCGAGTCCGTTCCAGTGGTGCCCTCGGTGGTGCGCGTTGGACAGGCCCCC
ATCTACGATGCTCCACTGGTGCAGTCCTATGGTGGATGGTTGAAGCAGAA
GGCAAGCTTTCTAGACCAT
BO34301.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15308-RB | 288 | CG15308-PB | 1..285 | 17..301 | 1425 | 100 | Plus |
CG15308-RC | 249 | CG15308-PC | 1..246 | 56..301 | 1230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15308-RB | 532 | CG15308-RB | 60..346 | 15..301 | 1435 | 100 | Plus |
CG15308-RC | 494 | CG15308-RC | 118..401 | 18..301 | 1405 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:49:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10218099..10218379 | 301..21 | 1405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:49:59 has no hits.
BO34301.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:11 Download gff for
BO34301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15308-RB | 62..346 | 17..303 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:51 Download gff for
BO34301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15308-RB | 62..346 | 17..303 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:51 Download gff for
BO34301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10218097..10218382 | 17..303 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:11 Download gff for
BO34301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10112130..10112415 | 17..303 | 98 | | Minus |
BO34301.pep Sequence
Translation from 16 to 319
> BO34301.pep
MKFFIAAFLIAACMALAQCSVIYSPVSSVPVVRSVPVIRSVPVVRSVPVV
RRVPVVRRVNVVESVPVVPSVVRVGQAPIYDAPLVQSYGGWLKQKASFLD
H
BO34301.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15308-PB | 95 | CG15308-PB | 1..95 | 1..95 | 470 | 100 | Plus |
CG15308-PC | 82 | CG15308-PC | 1..82 | 14..95 | 405 | 100 | Plus |
CG34268-PA | 83 | CG34268-PA | 5..70 | 5..70 | 140 | 48.5 | Plus |