BO34303.complete Sequence
490 bp assembled on 2013-09-16
GenBank Submission: KX800032
> BO34303.complete
GAAGTTATCAGTCGACATGTCACAACGGAACTTCAAGATGCCAAATCCGA
ACAACGAATCCCATTCCTATTTCCTCCGGAATATTCCGGAAGAATTGCAG
CCTCAGTTTACGCGTGGATTCAATCAGTGGATGGGCAATCAGTCTACGAT
GACTAAGGGTTTGCCATCCAATACAGTGAATAAGTCTGCCCAGACGGCAT
CTGTCAATGATGGCAACTTGCAAGCTAGCGTGATCGCAATGCTGGCAGGA
ATGGACTCGATCTTGGACATGGAGCAGCCTAACAGAAGTCCTTCGCGCGA
AGAGCACGAGCGCCTAAATGAGCTGTTGTTCAGCAGCAATTTGCTCATGC
TGGACGTAAAGAAGCGAACGTTTCCCGTGGAGGACCCAACTGGGTATTTA
ACTTCGGTTTCAGAGCAAAATCCAGATGGGAATCCGTTGGCTAAGCGACT
AAAGCTAGAGCGTCCTCAGGGCGCAAGCTTTCTAGACCAT
BO34303.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
jb-RC | 459 | CG15460-PC | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
jb-RC | 591 | CG15460-RC | 38..494 | 16..472 | 2285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20390440..20390769 | 345..16 | 1650 | 100 | Minus |
X | 23542271 | X | 20390257..20390383 | 472..346 | 635 | 100 | Minus |
X | 23542271 | X | 20383872..20384063 | 207..16 | 600 | 87.5 | Minus |
X | 23542271 | X | 20383583..20383698 | 473..358 | 295 | 83.6 | Minus |
X | 23542271 | X | 20383805..20383868 | 319..256 | 185 | 85.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:50:04 has no hits.
BO34303.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:14 Download gff for
BO34303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15460-RC | 39..494 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:53 Download gff for
BO34303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
jb-RC | 39..494 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:53 Download gff for
BO34303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20390254..20390383 | 346..474 | 98 | <- | Minus |
X | 20390440..20390768 | 17..345 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:14 Download gff for
BO34303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20261281..20261410 | 346..474 | 98 | <- | Minus |
arm_X | 20261467..20261795 | 17..345 | 100 | | Minus |
BO34303.pep Sequence
Translation from 16 to 490
> BO34303.pep
MSQRNFKMPNPNNESHSYFLRNIPEELQPQFTRGFNQWMGNQSTMTKGLP
SNTVNKSAQTASVNDGNLQASVIAMLAGMDSILDMEQPNRSPSREEHERL
NELLFSSNLLMLDVKKRTFPVEDPTGYLTSVSEQNPDGNPLAKRLKLERP
QGASFLDH
BO34303.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
jb-PC | 152 | CG15460-PC | 1..152 | 1..152 | 790 | 100 | Plus |