Clone BO34303 Report

Search the DGRC for BO34303

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG15460-RC
Protein status:BO34303.pep: Imported from assembly
Sequenced Size:490

Clone Sequence Records

BO34303.complete Sequence

490 bp assembled on 2013-09-16

GenBank Submission: KX800032

> BO34303.complete
GAAGTTATCAGTCGACATGTCACAACGGAACTTCAAGATGCCAAATCCGA
ACAACGAATCCCATTCCTATTTCCTCCGGAATATTCCGGAAGAATTGCAG
CCTCAGTTTACGCGTGGATTCAATCAGTGGATGGGCAATCAGTCTACGAT
GACTAAGGGTTTGCCATCCAATACAGTGAATAAGTCTGCCCAGACGGCAT
CTGTCAATGATGGCAACTTGCAAGCTAGCGTGATCGCAATGCTGGCAGGA
ATGGACTCGATCTTGGACATGGAGCAGCCTAACAGAAGTCCTTCGCGCGA
AGAGCACGAGCGCCTAAATGAGCTGTTGTTCAGCAGCAATTTGCTCATGC
TGGACGTAAAGAAGCGAACGTTTCCCGTGGAGGACCCAACTGGGTATTTA
ACTTCGGTTTCAGAGCAAAATCCAGATGGGAATCCGTTGGCTAAGCGACT
AAAGCTAGAGCGTCCTCAGGGCGCAAGCTTTCTAGACCAT

BO34303.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:06
Subject Length Description Subject Range Query Range Score Percent Strand
jb-RC 459 CG15460-PC 1..456 17..472 2280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:08
Subject Length Description Subject Range Query Range Score Percent Strand
jb-RC 591 CG15460-RC 38..494 16..472 2285 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20390440..20390769 345..16 1650 100 Minus
X 23542271 X 20390257..20390383 472..346 635 100 Minus
X 23542271 X 20383872..20384063 207..16 600 87.5 Minus
X 23542271 X 20383583..20383698 473..358 295 83.6 Minus
X 23542271 X 20383805..20383868 319..256 185 85.9 Minus
Blast to na_te.dros performed on 2014-11-28 13:50:04 has no hits.

BO34303.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:14 Download gff for BO34303.complete
Subject Subject Range Query Range Percent Splice Strand
CG15460-RC 39..494 17..474 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:53 Download gff for BO34303.complete
Subject Subject Range Query Range Percent Splice Strand
jb-RC 39..494 17..474 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:53 Download gff for BO34303.complete
Subject Subject Range Query Range Percent Splice Strand
X 20390254..20390383 346..474 98 <- Minus
X 20390440..20390768 17..345 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:14 Download gff for BO34303.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20261281..20261410 346..474 98 <- Minus
arm_X 20261467..20261795 17..345 100   Minus

BO34303.pep Sequence

Translation from 16 to 490

> BO34303.pep
MSQRNFKMPNPNNESHSYFLRNIPEELQPQFTRGFNQWMGNQSTMTKGLP
SNTVNKSAQTASVNDGNLQASVIAMLAGMDSILDMEQPNRSPSREEHERL
NELLFSSNLLMLDVKKRTFPVEDPTGYLTSVSEQNPDGNPLAKRLKLERP
QGASFLDH

BO34303.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
jb-PC 152 CG15460-PC 1..152 1..152 790 100 Plus