BO34305.complete Sequence
346 bp assembled on 2013-09-16
GenBank Submission: KX797046
> BO34305.complete
GAAGTTATCAGTCGACATGTCGCAAAGCATGTTCCCAAAGCTGGCCGAGG
ATTACGCGAAATTCAAGCGCTATGTGAAATGGCTGTACACCCTCTACGAA
CTGAACACACAGATCGCCATATGTGAGCCGTGGGAAAAGGTCTTCCTCAA
TGTCCTCCTCGGCAGCTTCGTCTCCCTGATCCTCTACGCATCCTTTGCCT
TTGTGCCGGGCTATTGTGTCACCGTCTTCCAGCTTTTATGGCCCCAAACG
AGCGTGCAAAATCTCACCAGCGTTTGCAGTACGAGTACGGAGGGCTTTTG
CGGCAACGAAAGCGGATCAGTAATAACAGCAAGCTTTCTAGACCAT
BO34305.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34194-RB | 315 | CG34194-PB | 1..312 | 17..328 | 1560 | 100 | Plus |
CG34194-RA | 315 | CG34194-PA | 1..312 | 17..328 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34194-RB | 655 | CG34194-RB | 298..610 | 16..328 | 1565 | 100 | Plus |
CG34194-RA | 413 | CG34194-RA | 56..368 | 16..328 | 1565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17544822..17545000 | 150..328 | 895 | 100 | Plus |
2R | 25286936 | 2R | 17544487..17544620 | 16..149 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:50:10 has no hits.
BO34305.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:15 Download gff for
BO34305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34194-RA | 57..368 | 17..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:55 Download gff for
BO34305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34194-RA | 57..368 | 17..330 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:55 Download gff for
BO34305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17544488..17544620 | 17..149 | 100 | -> | Plus |
2R | 17544822..17545000 | 150..330 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:15 Download gff for
BO34305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13431993..13432125 | 17..149 | 100 | -> | Plus |
arm_2R | 13432327..13432505 | 150..330 | 98 | | Plus |
BO34305.pep Sequence
Translation from 16 to 346
> BO34305.pep
MSQSMFPKLAEDYAKFKRYVKWLYTLYELNTQIAICEPWEKVFLNVLLGS
FVSLILYASFAFVPGYCVTVFQLLWPQTSVQNLTSVCSTSTEGFCGNESG
SVITASFLDH
BO34305.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34194-PB | 104 | CG34194-PB | 1..104 | 1..104 | 550 | 100 | Plus |
CG34194-PA | 104 | CG34194-PA | 1..104 | 1..104 | 550 | 100 | Plus |