Clone BO34306 Report

Search the DGRC for BO34306

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:6
Vector:pDNR-Dual
Associated Gene/TranscriptCG6149-RB
Protein status:BO34306.pep: Imported from assembly
Sequenced Size:736

Clone Sequence Records

BO34306.complete Sequence

736 bp assembled on 2013-09-16

GenBank Submission: KX799557

> BO34306.complete
GAAGTTATCAGTCGACATGGAGCGACTTAATTTGTCGAACAGGGCTCGCC
TGTTTTTCCACCTGTCGGCCACCGTTCACCTGGGCTATGCCATTTACTTT
GACTGTCGGTATGCCCAGTTGCCACAAGTGGCGGTGACCCTGCGCCTGGA
GCCACCGATTGGTGGCAAGTTTAAGTACATGACGTTTCTGTGCGGCCTTT
TGCAGTTGGGGTACTATACACTGGCGCTGACCTTTGACCTCCTCCGATTG
AGATCTCTAAGGAAGCTGCGAGACTACATCTTCGCCACCTTTGCCGTACC
TCTGGCCCTTACGGTGGGTCTCACCTTTTGGACACTCTTCGCCATCGATC
GGGAAGTGATATATCCGGTGCTTTTGGACCTGGTCTATCCCAATTGGCTG
AACCACACCATGCACACCTTCGTCGTAATCTATGCCTTTGTGGAGTTGGG
TATTACACGACATCAATATCCGAAACGCAGTCGAGGATTCACTGGACTGG
GTGCCTTCATGTTGGGATATCTGGTGTGGATACATATCGTTTGGTTCCGG
ACCGACATCTGGGTGTATCCCTTTCTGGGCGGCATCGCCTGGCAGCTGAG
AGTAATTTTCTTTGTCCTTATCATGGTCCTCGGATTCATTTACTATCTCT
TCGGCGAGCGAGTTAATAACGTCTTGTGGCAGCGATCTACTGGTGTCCAC
AGATGGATCGATTCCCATGCAAGCTTTCTAGACCAT

BO34306.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG6149-RB 705 CG6149-PB 1..702 17..718 3510 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG6149-RB 782 CG6149-RB 16..717 17..718 3510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11434760..11435461 718..17 3510 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:50:16 has no hits.

BO34306.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:16 Download gff for BO34306.complete
Subject Subject Range Query Range Percent Splice Strand
CG6149-RB 16..717 17..720 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:57 Download gff for BO34306.complete
Subject Subject Range Query Range Percent Splice Strand
CG6149-RB 16..717 17..720 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:57 Download gff for BO34306.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11434757..11435461 17..720 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:16 Download gff for BO34306.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11427857..11428561 17..720 99   Minus

BO34306.pep Sequence

Translation from 16 to 736

> BO34306.pep
MERLNLSNRARLFFHLSATVHLGYAIYFDCRYAQLPQVAVTLRLEPPIGG
KFKYMTFLCGLLQLGYYTLALTFDLLRLRSLRKLRDYIFATFAVPLALTV
GLTFWTLFAIDREVIYPVLLDLVYPNWLNHTMHTFVVIYAFVELGITRHQ
YPKRSRGFTGLGAFMLGYLVWIHIVWFRTDIWVYPFLGGIAWQLRVIFFV
LIMVLGFIYYLFGERVNNVLWQRSTGVHRWIDSHASFLDH

BO34306.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG6149-PB 234 CG6149-PB 1..234 1..234 1254 100 Plus
CG3625-PB 248 CG3625-PB 18..238 11..223 527 43.4 Plus
CG3625-PA 245 CG3625-PA 23..235 11..223 471 39.4 Plus
CG3625-PE 247 CG3625-PE 8..237 9..223 422 37 Plus
CG3625-PC 247 CG3625-PC 8..237 9..223 422 37 Plus