BO34306.complete Sequence
736 bp assembled on 2013-09-16
GenBank Submission: KX799557
> BO34306.complete
GAAGTTATCAGTCGACATGGAGCGACTTAATTTGTCGAACAGGGCTCGCC
TGTTTTTCCACCTGTCGGCCACCGTTCACCTGGGCTATGCCATTTACTTT
GACTGTCGGTATGCCCAGTTGCCACAAGTGGCGGTGACCCTGCGCCTGGA
GCCACCGATTGGTGGCAAGTTTAAGTACATGACGTTTCTGTGCGGCCTTT
TGCAGTTGGGGTACTATACACTGGCGCTGACCTTTGACCTCCTCCGATTG
AGATCTCTAAGGAAGCTGCGAGACTACATCTTCGCCACCTTTGCCGTACC
TCTGGCCCTTACGGTGGGTCTCACCTTTTGGACACTCTTCGCCATCGATC
GGGAAGTGATATATCCGGTGCTTTTGGACCTGGTCTATCCCAATTGGCTG
AACCACACCATGCACACCTTCGTCGTAATCTATGCCTTTGTGGAGTTGGG
TATTACACGACATCAATATCCGAAACGCAGTCGAGGATTCACTGGACTGG
GTGCCTTCATGTTGGGATATCTGGTGTGGATACATATCGTTTGGTTCCGG
ACCGACATCTGGGTGTATCCCTTTCTGGGCGGCATCGCCTGGCAGCTGAG
AGTAATTTTCTTTGTCCTTATCATGGTCCTCGGATTCATTTACTATCTCT
TCGGCGAGCGAGTTAATAACGTCTTGTGGCAGCGATCTACTGGTGTCCAC
AGATGGATCGATTCCCATGCAAGCTTTCTAGACCAT
BO34306.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6149-RB | 705 | CG6149-PB | 1..702 | 17..718 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6149-RB | 782 | CG6149-RB | 16..717 | 17..718 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11434760..11435461 | 718..17 | 3510 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:50:16 has no hits.
BO34306.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:16 Download gff for
BO34306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6149-RB | 16..717 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:57 Download gff for
BO34306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6149-RB | 16..717 | 17..720 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:57 Download gff for
BO34306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11434757..11435461 | 17..720 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:16 Download gff for
BO34306.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11427857..11428561 | 17..720 | 99 | | Minus |
BO34306.pep Sequence
Translation from 16 to 736
> BO34306.pep
MERLNLSNRARLFFHLSATVHLGYAIYFDCRYAQLPQVAVTLRLEPPIGG
KFKYMTFLCGLLQLGYYTLALTFDLLRLRSLRKLRDYIFATFAVPLALTV
GLTFWTLFAIDREVIYPVLLDLVYPNWLNHTMHTFVVIYAFVELGITRHQ
YPKRSRGFTGLGAFMLGYLVWIHIVWFRTDIWVYPFLGGIAWQLRVIFFV
LIMVLGFIYYLFGERVNNVLWQRSTGVHRWIDSHASFLDH
BO34306.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6149-PB | 234 | CG6149-PB | 1..234 | 1..234 | 1254 | 100 | Plus |
CG3625-PB | 248 | CG3625-PB | 18..238 | 11..223 | 527 | 43.4 | Plus |
CG3625-PA | 245 | CG3625-PA | 23..235 | 11..223 | 471 | 39.4 | Plus |
CG3625-PE | 247 | CG3625-PE | 8..237 | 9..223 | 422 | 37 | Plus |
CG3625-PC | 247 | CG3625-PC | 8..237 | 9..223 | 422 | 37 | Plus |