BO34307.complete Sequence
436 bp assembled on 2013-09-16
GenBank Submission: KX795754
> BO34307.complete
GAAGTTATCAGTCGACATGCGACTTTTTCCAGTTTACTTTGCTATAATCT
TCCTGTTTCAATATGATGTCTACTCCATATCGGATAATTTGAAAACCGAA
CTGCGATCCTGGTTTGGAAATATAAAGCAACTGCACAATCCGGCAACGCT
CAACACTCTGAAAATGCTGTGCGTTGTGGAAGTGATGCGGGGCAGCAAAC
ATCGGATAAATGTTGGCAATATTGACATTTTGAATAAGAATACTTTGGAA
AACTTCATCAAGCTGCCGAGCTTTAAAATGCCGAACATCACAATTGTCAT
CGTGGAAGACGAGTTGTCCAAGATTGCGAGAAGCGGGAGTCAGTATAAGG
AACGGGAAATGGAAAAGCTAGTTCAACATTTTAAGGAATGTATACTTGCA
AAACTTAAGGCACTATCTGCAAGCTTTCTAGACCAT
BO34307.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1701-RB | 405 | CG1701-PB | 1..402 | 17..418 | 2010 | 100 | Plus |
CG1701-RC | 405 | CG1701-PC | 1..402 | 17..418 | 2010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1701-RB | 453 | CG1701-RB | 26..427 | 17..418 | 2010 | 100 | Plus |
CG1701-RC | 952 | CG1701-RC | 26..427 | 17..418 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7408896..7409273 | 418..41 | 1890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:50:22 has no hits.
BO34307.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:18 Download gff for
BO34307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1701-RC | 26..427 | 17..420 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:58 Download gff for
BO34307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1701-RC | 26..427 | 17..420 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:58 Download gff for
BO34307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7408894..7409272 | 42..420 | 99 | <- | Minus |
2R | 7409336..7409360 | 17..41 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:18 Download gff for
BO34307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3296399..3296777 | 42..420 | 99 | <- | Minus |
arm_2R | 3296841..3296865 | 17..41 | 100 | | Minus |
BO34307.pep Sequence
Translation from 16 to 436
> BO34307.pep
MRLFPVYFAIIFLFQYDVYSISDNLKTELRSWFGNIKQLHNPATLNTLKM
LCVVEVMRGSKHRINVGNIDILNKNTLENFIKLPSFKMPNITIVIVEDEL
SKIARSGSQYKEREMEKLVQHFKECILAKLKALSASFLDH
BO34307.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1701-PB | 134 | CG1701-PB | 1..134 | 1..134 | 683 | 100 | Plus |
CG1701-PC | 134 | CG1701-PC | 1..134 | 1..134 | 683 | 100 | Plus |
CG11113-PB | 138 | CG11113-PB | 1..133 | 1..133 | 256 | 38.8 | Plus |