Clone BO34307 Report

Search the DGRC for BO34307

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG1701-RB
Protein status:BO34307.pep: Imported from assembly
Sequenced Size:436

Clone Sequence Records

BO34307.complete Sequence

436 bp assembled on 2013-09-16

GenBank Submission: KX795754

> BO34307.complete
GAAGTTATCAGTCGACATGCGACTTTTTCCAGTTTACTTTGCTATAATCT
TCCTGTTTCAATATGATGTCTACTCCATATCGGATAATTTGAAAACCGAA
CTGCGATCCTGGTTTGGAAATATAAAGCAACTGCACAATCCGGCAACGCT
CAACACTCTGAAAATGCTGTGCGTTGTGGAAGTGATGCGGGGCAGCAAAC
ATCGGATAAATGTTGGCAATATTGACATTTTGAATAAGAATACTTTGGAA
AACTTCATCAAGCTGCCGAGCTTTAAAATGCCGAACATCACAATTGTCAT
CGTGGAAGACGAGTTGTCCAAGATTGCGAGAAGCGGGAGTCAGTATAAGG
AACGGGAAATGGAAAAGCTAGTTCAACATTTTAAGGAATGTATACTTGCA
AAACTTAAGGCACTATCTGCAAGCTTTCTAGACCAT

BO34307.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG1701-RB 405 CG1701-PB 1..402 17..418 2010 100 Plus
CG1701-RC 405 CG1701-PC 1..402 17..418 2010 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG1701-RB 453 CG1701-RB 26..427 17..418 2010 100 Plus
CG1701-RC 952 CG1701-RC 26..427 17..418 2010 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7408896..7409273 418..41 1890 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:50:22 has no hits.

BO34307.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:18 Download gff for BO34307.complete
Subject Subject Range Query Range Percent Splice Strand
CG1701-RC 26..427 17..420 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:58 Download gff for BO34307.complete
Subject Subject Range Query Range Percent Splice Strand
CG1701-RC 26..427 17..420 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:58 Download gff for BO34307.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7408894..7409272 42..420 99 <- Minus
2R 7409336..7409360 17..41 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:18 Download gff for BO34307.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3296399..3296777 42..420 99 <- Minus
arm_2R 3296841..3296865 17..41 100   Minus

BO34307.pep Sequence

Translation from 16 to 436

> BO34307.pep
MRLFPVYFAIIFLFQYDVYSISDNLKTELRSWFGNIKQLHNPATLNTLKM
LCVVEVMRGSKHRINVGNIDILNKNTLENFIKLPSFKMPNITIVIVEDEL
SKIARSGSQYKEREMEKLVQHFKECILAKLKALSASFLDH

BO34307.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG1701-PB 134 CG1701-PB 1..134 1..134 683 100 Plus
CG1701-PC 134 CG1701-PC 1..134 1..134 683 100 Plus
CG11113-PB 138 CG11113-PB 1..133 1..133 256 38.8 Plus