Clone BO34308 Report

Search the DGRC for BO34308

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG42591-RA
Protein status:BO34308.pep: Imported from assembly
Sequenced Size:511

Clone Sequence Records

BO34308.complete Sequence

511 bp assembled on 2013-09-16

GenBank Submission: KX797674

> BO34308.complete
GAAGTTATCAGTCGACATGGACATTCAGAAGAAAAATATGAAGTCACCTT
CGAAGGATTCATCTGATTCCCCTGATGAAAAGCGCAAGTCCTTAGAAATC
GTGCCCCTATTAAAACCAGTTACCTTCAGTATTTCATACAGCTTTGGATT
GAATTGGTATTTGATCAACATGGAAGACTACATTCCTCGGAGAAAGAGGA
GGTACTTCATCAACCTATCGCTCTTCACCGATCAACTGCATACTTTCATC
CAGAGCACTCTGCTCCTCCTAAAGCGCCCAAAATGGAGCACCATCTTTCT
GGCCACAACACCTCATAGCTTCACGTACTATCAAGCCCACTTCCCGATGA
AACCCATCCTGACATTCTCACCCATGATCAAGTCGACTTCGAAACTGGAA
TCTTGGAAGATTAAGGTAAAAGCCGGACATCCGCCCATGATAAACAATTC
TAGGCCATCAAGGTCAAGTTCAGTAGCAAGTCGGTCTCGCAAAGCAAGCT
TTCTAGACCAT

BO34308.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG42591-RA 480 CG42591-PA 1..477 17..493 2370 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG42591-RA 508 CG42591-RA 22..499 16..493 2375 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8069462..8069939 493..16 2375 99.8 Minus
Blast to na_te.dros performed on 2014-11-28 13:50:28 has no hits.

BO34308.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:20 Download gff for BO34308.complete
Subject Subject Range Query Range Percent Splice Strand
CG42591-RA 23..499 17..495 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:00 Download gff for BO34308.complete
Subject Subject Range Query Range Percent Splice Strand
CG42591-RA 23..499 17..495 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:00 Download gff for BO34308.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8069460..8069938 17..495 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:20 Download gff for BO34308.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8062560..8063038 17..495 99   Minus

BO34308.pep Sequence

Translation from 16 to 511

> BO34308.pep
MDIQKKNMKSPSKDSSDSPDEKRKSLEIVPLLKPVTFSISYSFGLNWYLI
NMEDYIPRRKRRYFINLSLFTDQLHTFIQSTLLLLKRPKWSTIFLATTPH
SFTYYQAHFPMKPILTFSPMIKSTSKLESWKIKVKAGHPPMINNSRPSRS
SSVASRSRKASFLDH

BO34308.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG42591-PA 159 CG42591-PA 1..159 1..159 827 100 Plus