BO34309.complete Sequence
835 bp assembled on 2013-09-16
GenBank Submission: KX795149
> BO34309.complete
GAAGTTATCAGTCGACATGAGAGTTTACCACTTGCTGCTGATTGGATTAG
TTTTGGCGACTATCGCCGGCGGTCATGAGGCTTTGGCACATCCGCCTAGA
GCCGATACCCCACCGTGTACTCCTCCCCCGGATCCGTGCACAACAACAAC
ATGCCCACCACCACCGCCGTGCACCACAACAACATGTCCACCACCAGAAC
CACCACCGTGCACCACAACAACATGCCCACCACCAGAACCACCACCGTGC
ACCACAACAACATGCCCACCACCACCACCTCCGTGCATTACTACAACGTG
CCCACCACCACCACCACCTCCACCACCACCACCACCACCACCGTGCACCA
GGACACCACCTCCATGCACCAGGACACCACCTCCATGCACCAGGACACCA
CCTCCATGCACCAGGACACCTCCTCCATGCACCAGGACACCACCCCCCTG
CACCAGGACACCTCCATGCACCACCACTCCTCCCTGCACCCCACCGTGCA
CCACCACCAAGCCCTGCACCACAACCGTTTGCACAACACCCAAGAGCGAC
AACGCTGGGCCAATTGTCGACGGAAATGAAGAACAGCCCGATATAGACAA
TCCAGTTGCTATTGCCCAGGTGCTGATCTCGCGCCACGATTGCCGTGGCC
AGGAGGACGGAACCTTCCTCGCCGACGTGCGTCACTGTCGCCGCTACTAC
GTGTGCAACCGTCAGAGGTCGAAGCGCCAGAACTGCCCCAACGGCTACTG
GTTCGATCGCGAGCTGAAGGCCTGCCGACTGGCCAGTACCGTCAACAACT
GTGACGCCAGGCGCAACGCAAGCTTTCTAGACCAT
BO34309.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34324-RA | 804 | CG34324-PA | 1..801 | 17..817 | 4005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34324-RA | 1035 | CG34324-RA | 51..853 | 15..817 | 4015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13456716..13457506 | 817..27 | 3955 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:50:34 has no hits.
BO34309.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:22 Download gff for
BO34309.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34324-RA | 53..853 | 17..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:02 Download gff for
BO34309.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34324-RA | 53..853 | 17..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:02 Download gff for
BO34309.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13456713..13457506 | 27..819 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:22 Download gff for
BO34309.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13350746..13351539 | 27..819 | 99 | | Minus |
BO34309.pep Sequence
Translation from 16 to 835
> BO34309.pep
MRVYHLLLIGLVLATIAGGHEALAHPPRADTPPCTPPPDPCTTTTCPPPP
PCTTTTCPPPEPPPCTTTTCPPPEPPPCTTTTCPPPPPPCITTTCPPPPP
PPPPPPPPPCTRTPPPCTRTPPPCTRTPPPCTRTPPPCTRTPPPCTRTPP
CTTTPPCTPPCTTTKPCTTTVCTTPKSDNAGPIVDGNEEQPDIDNPVAIA
QVLISRHDCRGQEDGTFLADVRHCRRYYVCNRQRSKRQNCPNGYWFDREL
KACRLASTVNNCDARRNASFLDH
BO34309.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34324-PA | 267 | CG34324-PA | 1..267 | 1..267 | 1608 | 100 | Plus |
| CG34220-PA | 726 | CG34220-PA | 404..726 | 27..267 | 320 | 32.5 | Plus |
| CG13731-PB | 792 | CG13731-PB | 98..266 | 26..176 | 283 | 45.7 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 390..558 | 27..191 | 283 | 39.1 | Plus |
| CG5514-PA | 1109 | CG5514-PA | 390..558 | 27..191 | 283 | 39.1 | Plus |
| CG13731-PB | 792 | CG13731-PB | 64..232 | 26..182 | 282 | 46 | Plus |
| CG13731-PB | 792 | CG13731-PB | 140..322 | 26..175 | 276 | 43.7 | Plus |
| CG13731-PB | 792 | CG13731-PB | 368..533 | 27..175 | 269 | 43.5 | Plus |
| CG13731-PB | 792 | CG13731-PB | 36..205 | 36..198 | 262 | 42.2 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 403..497 | 26..116 | 262 | 50.5 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 366..501 | 27..160 | 261 | 40.7 | Plus |
| CG13731-PB | 792 | CG13731-PB | 203..384 | 26..169 | 258 | 40.9 | Plus |
| CG13731-PB | 792 | CG13731-PB | 397..554 | 26..175 | 254 | 41.8 | Plus |
| CG13731-PB | 792 | CG13731-PB | 476..657 | 27..175 | 253 | 39.2 | Plus |
| CG13731-PB | 792 | CG13731-PB | 221..425 | 28..175 | 249 | 40 | Plus |
| CG13731-PB | 792 | CG13731-PB | 265..466 | 27..184 | 249 | 37.6 | Plus |
| CG13731-PB | 792 | CG13731-PB | 430..636 | 26..175 | 245 | 39.6 | Plus |
| CG13731-PB | 792 | CG13731-PB | 579..737 | 27..175 | 243 | 40.5 | Plus |
| CG13731-PB | 792 | CG13731-PB | 421..595 | 28..169 | 239 | 40.2 | Plus |
| CG13731-PB | 792 | CG13731-PB | 321..492 | 27..169 | 236 | 38.3 | Plus |
| CG34220-PA | 726 | CG34220-PA | 168..335 | 31..174 | 231 | 39.3 | Plus |
| CG13731-PB | 792 | CG13731-PB | 608..773 | 26..175 | 225 | 39.2 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 346..473 | 26..166 | 225 | 37.1 | Plus |
| CG34220-PA | 726 | CG34220-PA | 155..308 | 31..174 | 222 | 39 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 416..500 | 26..109 | 220 | 50 | Plus |
| CG13731-PB | 792 | CG13731-PB | 532..729 | 27..183 | 211 | 36.4 | Plus |
| CG34220-PA | 726 | CG34220-PA | 140..293 | 31..174 | 210 | 40.3 | Plus |
| CG34220-PA | 726 | CG34220-PA | 315..460 | 31..174 | 207 | 39.3 | Plus |
| CG34220-PA | 726 | CG34220-PA | 323..467 | 31..174 | 207 | 37.3 | Plus |
| CG34220-PA | 726 | CG34220-PA | 252..444 | 27..174 | 203 | 32.6 | Plus |
| CG34220-PA | 726 | CG34220-PA | 1..160 | 1..174 | 200 | 35 | Plus |
| CG34220-PA | 726 | CG34220-PA | 198..368 | 30..191 | 199 | 33.7 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 344..457 | 49..163 | 199 | 38 | Plus |
| CG34220-PA | 726 | CG34220-PA | 363..558 | 21..174 | 198 | 32.8 | Plus |
| CG34220-PA | 726 | CG34220-PA | 128..292 | 31..174 | 189 | 36.4 | Plus |
| CG34220-PA | 726 | CG34220-PA | 214..382 | 26..196 | 174 | 33 | Plus |
| CG5514-PC | 1109 | CG5514-PC | 430..501 | 26..102 | 157 | 44.3 | Plus |
| CG13731-PB | 792 | CG13731-PB | 682..786 | 27..116 | 151 | 39 | Plus |
