BO34310.complete Sequence
877 bp assembled on 2013-09-16
GenBank Submission: KX796988
> BO34310.complete
GAAGTTATCAGTCGACATGTCCGCTCCTGTAGAGGGTGTTCCCTATGAGG
AGATCCAGACAAAAGAGCTTATAGGCACCGGATTCTATGGCAGCGTATAC
AGGGCGGTCTGGAGAAATCGTGAGATCGCGCTGAAGAGAATTCGCGAGGG
ATGTGAGGATAAAAAGATTGAAAGAGAGATCTACCAGCTGACAAAGGCCA
GCCATGTCAACATAGTTGAGCTCTACGGCACATCGAGGCACGAGGGATGC
GCCCTGCTGTTGATGGAATTCGTAGACGGTGGATCTCTGTCCAGTTTTCT
GCACGCGAAAAGCAAGCCAAGTTATTCGCATGCCCACGCCTTCAACTGGG
CGCATCAGATCGCTCAGGGCATAGCCTATCTGCATGGCATGCAGCCGAAA
GCAGTAATTCATCGCGATATAAAGCCACTCAATACACTGCTATGCGAGAA
GGGACTCAAACTGAAGATTTGCGATTTCGGAACTGTTGTGGACCTATCCC
AATCGATATCGTGCAATGCGGGCACCTGCAGATACAAAGCGCCCGAGGTT
CTACAAGGAAATAAACCCGATGAAAAGTGCGATGTGTATAGTTGGGCTAT
TACCTTTTGGGAAATATTGTCGCGCAAGGAGCCATTTGAGCAATATAATA
CGCTTTTTGAACTGTACATGGCTATTAATGAAGGCGAGAGACCGGATTTA
AGTTGCATTATGTCTGGCTGCCCCGCGGATATAGTTGCTCTTTTGTACGC
TTCTTGGGATCCGGATATCAGCAAAAGATTTTCTATGGAACTGATTTCCC
AAAGCATGGGTAGAATCCTAAGTGAGGCGGGATCCATTCCACCACTGGAT
TTTTACTCAGCAAGCTTTCTAGACCAT
BO34310.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:49:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Takl2-RB | 846 | CG4803-PB | 1..843 | 17..859 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:49:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Takl2-RB | 928 | CG4803-RB | 27..869 | 17..859 | 4215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:49:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22733407..22733709 | 368..66 | 1515 | 100 | Minus |
3R | 32079331 | 3R | 22732852..22733035 | 549..366 | 920 | 100 | Minus |
3R | 32079331 | 3R | 22732415..22732592 | 859..682 | 890 | 100 | Minus |
3R | 32079331 | 3R | 22732644..22732789 | 691..546 | 715 | 99.3 | Minus |
3R | 32079331 | 3R | 22733775..22733825 | 67..17 | 255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:49:40 has no hits.
BO34310.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:04 Download gff for
BO34310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Takl2-RB | 27..869 | 17..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:46 Download gff for
BO34310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Takl2-RB | 27..869 | 17..861 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:46 Download gff for
BO34310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22732413..22732590 | 684..861 | 98 | <- | Minus |
3R | 22732652..22732787 | 548..683 | 100 | <- | Minus |
3R | 22732854..22733033 | 368..547 | 100 | <- | Minus |
3R | 22733408..22733707 | 68..367 | 100 | <- | Minus |
3R | 22733775..22733825 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:04 Download gff for
BO34310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18558135..18558312 | 684..861 | 98 | <- | Minus |
arm_3R | 18558374..18558509 | 548..683 | 100 | <- | Minus |
arm_3R | 18558576..18558755 | 368..547 | 100 | <- | Minus |
arm_3R | 18559130..18559429 | 68..367 | 100 | <- | Minus |
arm_3R | 18559497..18559547 | 17..67 | 100 | | Minus |
BO34310.pep Sequence
Translation from 16 to 877
> BO34310.pep
MSAPVEGVPYEEIQTKELIGTGFYGSVYRAVWRNREIALKRIREGCEDKK
IEREIYQLTKASHVNIVELYGTSRHEGCALLLMEFVDGGSLSSFLHAKSK
PSYSHAHAFNWAHQIAQGIAYLHGMQPKAVIHRDIKPLNTLLCEKGLKLK
ICDFGTVVDLSQSISCNAGTCRYKAPEVLQGNKPDEKCDVYSWAITFWEI
LSRKEPFEQYNTLFELYMAINEGERPDLSCIMSGCPADIVALLYASWDPD
ISKRFSMELISQSMGRILSEAGSIPPLDFYSASFLDH
BO34310.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Takl2-PB | 281 | CG4803-PB | 1..281 | 1..281 | 1490 | 100 | Plus |
Tak1-PA | 678 | CG18492-PA | 14..273 | 8..270 | 644 | 47.1 | Plus |
Takl1-PA | 393 | CG31421-PA | 2..283 | 5..278 | 432 | 36.6 | Plus |
slpr-PD | 1148 | CG2272-PD | 124..402 | 8..280 | 293 | 30.1 | Plus |
slpr-PC | 1148 | CG2272-PC | 124..402 | 8..280 | 293 | 30.1 | Plus |