Clone BO34311 Report

Search the DGRC for BO34311

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG12826-RA
Protein status:BO34311.pep: Imported from assembly
Sequenced Size:424

Clone Sequence Records

BO34311.complete Sequence

424 bp assembled on 2013-09-16

GenBank Submission: KX799144

> BO34311.complete
GAAGTTATCAGTCGACATGGATCTTAAGCAATTGTACTCGTGGATCTGCC
TGCTGATCAGCATCATCATCTGCAAAGTGTCCGAGGCCAAGCCCACCTAC
TACGACTTGGATAGCTACGAAAACTACGACACAGATCGCTATGACAGCTA
CGGCGGGTCCTCGTACGCCCTGACCTACGGGAAACCGTTAACGGACAACC
GCCTTAAGAAGCTGAGTCCGGGCTACTACTACGTGGACGATGGGTACATC
GCCCCGGTGGCCTCCAGCGCCGGCTACACCCGCCGCGAGGGCGTCTCCGC
CTCCGACAGTGGCTCCTTGCCCCACAATGTCAAGTTTACTCCCATCGTGC
GCGTCCGGCAGACCAAGACCAAGCGCAAGAAGCTCTTCGTGCCCAACTTC
TTTGGCGCAAGCTTTCTAGACCAT

BO34311.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG12826-RA 393 CG12826-PA 1..390 17..406 1950 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:49:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG12826-RA 717 CG12826-RA 102..491 17..406 1950 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7670553..7670932 406..27 1900 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:49:47 has no hits.

BO34311.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:07 Download gff for BO34311.complete
Subject Subject Range Query Range Percent Splice Strand
CG12826-RA 102..491 17..408 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:48 Download gff for BO34311.complete
Subject Subject Range Query Range Percent Splice Strand
CG12826-RA 102..491 17..408 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:48 Download gff for BO34311.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7670551..7670937 22..408 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:07 Download gff for BO34311.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3558056..3558442 22..408 98   Minus

BO34311.pep Sequence

Translation from 16 to 424

> BO34311.pep
MDLKQLYSWICLLISIIICKVSEAKPTYYDLDSYENYDTDRYDSYGGSSY
ALTYGKPLTDNRLKKLSPGYYYVDDGYIAPVASSAGYTRREGVSASDSGS
LPHNVKFTPIVRVRQTKTKRKKLFVPNFFGASFLDH

BO34311.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG12826-PA 130 CG12826-PA 1..130 1..130 690 100 Plus