BO34312.complete Sequence
1009 bp assembled on 2013-09-16
GenBank Submission: KX794543
> BO34312.complete
GAAGTTATCAGTCGACATGGTTGACTTAAATATTTTAAATTTGAATGAAG
ACTGTCTTCAACACATTCTTAAGTATCTAAGCATCAAAGATCTTGTAAAT
TTAGCGGATACCCTGCCCAGGTTTCGACAGATTTTGTTGGACAGACCGCC
AACCTCGTACCCAGTACATCATGGAAACGATCCCGATGGTGTGAAACCAG
TATTGTATTACTCAACAGTTGCCATCAAGCTGTTGAGGATCGTCAAGAAT
AACGTAAAAACTTTGGGAGTTATCCAAGGACATAGTTATGATAAGGAGGA
TCTAGGCAACTTTGTCAAAGACTTCCGAATTCTAACACAAGGAAGAAACA
AAATTGATCTGAGGTATTGCCTTGGAGAAATGTCCAGACTTGAGGATATG
TTTCGATTTTCGTCTTGCTCTCGTGACTATTTGAGTGTAAACGTCCCATC
TTGTATTTGTTACCTTGCGGATTTTTTTCAACTTATTCCCGGTTTGCGGG
AGCTTCGACTTTCCGGATTTGCCAAGTGTTCGGATTGTGTTAAAACAATT
TTGAAATGCTTTCCCAAGCTGGAGGAACTCTGGATTCGGGGAACCTGCCT
CAAACTTCGATCTGATTATGAGCTGATATCGCAGATGAAATCTTTGACGA
AACTGTCGATAAATGTTGGTGGTTCTAATTGTCTAGGGCCTTTGACCAAT
TTAACTGAACTCCGATCTCTTTATGTGGAGAGTATCTTCAGCTACATATC
TCCAATTGAAATTATAGAAATCATAAAGAAGTGTAAGAAGTTGCAATTCC
TATTCTGCTACTACATAAATCATGGAGAACAGCCACACGATTCCATTGCA
AATATATTCAAGAGCATTAGATCGACTCGAGATCCTAACCGTCAAACCCC
CCTTCAATTGCACACATATTTGGATCCACCATTGTGTGAAGAAAATAGAC
AACTAATTGATGAAGCCTACTTCGAATATCGCCGGCTGCCTGCAAGCTTT
CTAGACCAT
BO34312.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:49:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34025-RB | 978 | CG34025-PB | 1..975 | 17..991 | 4875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:49:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34025-RB | 1202 | CG34025-RB | 47..1021 | 17..991 | 4875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:49:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2960014..2960540 | 946..420 | 2635 | 100 | Minus |
| 3L | 28110227 | 3L | 2960601..2961003 | 419..17 | 2015 | 100 | Minus |
| 3L | 28110227 | 3L | 2959903..2959947 | 991..947 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:49:53 has no hits.
BO34312.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:09 Download gff for
BO34312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34025-RB | 47..1021 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:49 Download gff for
BO34312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34025-RB | 47..1021 | 17..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:49 Download gff for
BO34312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2959900..2959947 | 947..993 | 95 | <- | Minus |
| 3L | 2960014..2960540 | 420..946 | 100 | <- | Minus |
| 3L | 2960601..2961003 | 17..419 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:09 Download gff for
BO34312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2959900..2959947 | 947..993 | 95 | <- | Minus |
| arm_3L | 2960014..2960540 | 420..946 | 100 | <- | Minus |
| arm_3L | 2960601..2961003 | 17..419 | 100 | | Minus |
BO34312.pep Sequence
Translation from 16 to 1009
> BO34312.pep
MVDLNILNLNEDCLQHILKYLSIKDLVNLADTLPRFRQILLDRPPTSYPV
HHGNDPDGVKPVLYYSTVAIKLLRIVKNNVKTLGVIQGHSYDKEDLGNFV
KDFRILTQGRNKIDLRYCLGEMSRLEDMFRFSSCSRDYLSVNVPSCICYL
ADFFQLIPGLRELRLSGFAKCSDCVKTILKCFPKLEELWIRGTCLKLRSD
YELISQMKSLTKLSINVGGSNCLGPLTNLTELRSLYVESIFSYISPIEII
EIIKKCKKLQFLFCYYINHGEQPHDSIANIFKSIRSTRDPNRQTPLQLHT
YLDPPLCEENRQLIDEAYFEYRRLPASFLDH
BO34312.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34025-PB | 325 | CG34025-PB | 1..325 | 1..325 | 1716 | 100 | Plus |
