BO34317.complete Sequence
529 bp assembled on 2013-09-16
GenBank Submission: KX797343
> BO34317.complete
GAAGTTATCAGTCGACATGAAATTTTTTGTATTGCTAGTTTACATTTGCT
TGGCTCTCAAGTGCGGGCACCCGATAAACCTAAAAAATTACTATACTTCC
ACAACGCCTTTCTCTTCAGCCGATCATGAAATTTCATTTCCGGCTTGCGC
AAATTGTTCAAGTGAAAAGAACTTTCGTACCAACACTGATTTTCATTGCC
ACTTCGAAGATGACTCGGCCATTGAGGAAAATTTTGGAAAATGGACAAAT
AGTTATCCGGACTGCCTGCCAGACCACTTTATTGCAACTCGGAAAATAAA
AGCGTATTGCTGCTTTTGGTCACCGAAATTGGGATGCTCTGCGCTGATCG
GAAGGAAGTTCTACGATAAGAAAATATATAGCTGCAAGACTTGCAGACGA
TTTTGCAGCGCAACTAAGCAAACCTATGTCGATGATTCGGATGGAAGTGA
TAAGGTCTCGGAATCCTACGGATTCTCAGTTTTATTGGCCTTTCTGCTAC
TTAGCATATACGCAAGCTTTCTAGACCAT
BO34317.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34258-RA | 498 | CG34258-PA | 1..495 | 17..511 | 2460 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34258-RA | 623 | CG34258-RA | 13..507 | 17..511 | 2460 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19951351..19951571 | 511..291 | 1090 | 99.5 | Minus |
| 3L | 28110227 | 3L | 19951625..19951798 | 291..118 | 870 | 100 | Minus |
| 3L | 28110227 | 3L | 19951854..19951956 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:50:51 has no hits.
BO34317.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:28 Download gff for
BO34317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34258-RA | 13..507 | 17..513 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:07 Download gff for
BO34317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34258-RA | 13..507 | 17..513 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:07 Download gff for
BO34317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19951349..19951571 | 291..513 | 98 | <- | Minus |
| 3L | 19951626..19951796 | 120..290 | 100 | <- | Minus |
| 3L | 19951854..19951956 | 17..119 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:28 Download gff for
BO34317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19944449..19944671 | 291..513 | 98 | <- | Minus |
| arm_3L | 19944726..19944896 | 120..290 | 100 | <- | Minus |
| arm_3L | 19944954..19945056 | 17..119 | 100 | | Minus |
BO34317.pep Sequence
Translation from 16 to 529
> BO34317.pep
MKFFVLLVYICLALKCGHPINLKNYYTSTTPFSSADHEISFPACANCSSE
KNFRTNTDFHCHFEDDSAIEENFGKWTNSYPDCLPDHFIATRKIKAYCCF
WSPKLGCSALIGRKFYDKKIYSCKTCRRFCSATKQTYVDDSDGSDKVSES
YGFSVLLAFLLLSIYASFLDH
BO34317.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34258-PA | 165 | CG34258-PA | 1..165 | 1..165 | 915 | 100 | Plus |
| CG33710-PA | 162 | CG33710-PA | 1..162 | 1..164 | 337 | 40.4 | Plus |
| CG32219-PA | 150 | CG32219-PA | 48..150 | 59..171 | 179 | 32.7 | Plus |
