Clone BO34318 Report

Search the DGRC for BO34318

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG43062-RA
Protein status:BO34318.pep: Imported from assembly
Sequenced Size:556

Clone Sequence Records

BO34318.complete Sequence

556 bp assembled on 2013-09-16

GenBank Submission: KX798388

> BO34318.complete
GAAGTTATCAGTCGACATGGGAATAAGCCCACAATGCTGGCCAATCAAGA
ATAAGACATTCGTGTTTTTGTGCCGGGGCATACACGAAAGAAGGTCAAAG
AAAAAGACACTTTCAACGTATTATACTCTTCCCCATTACCACAATCAGGA
CGAAAACCACAAGTACGCCTTTTTCCATGTGGAAAACGATTCTCGAGTTT
TCTTCATTACAATTGGGAGAAGCCGGCTAAACAATCTCGATTGGTTTCTA
GTGGATAAATGGGGCAAATTCATTCGAAATGGGACATCAGTCTACGATTA
CCACACGGGCTTCGAGTGCGTGTACAAAAGGATCCATTTCTTGGAGAGAC
TGCTTAAAGAATGCTTGGCTAAGCAAAATTCCACGCAAAGGAACAGCACG
AATCCCGAGTTGATGGTTCTACACTTCCCGGAAACGAAGGCACCAACCTA
CCACATGGTATCCATTGGAGACAATACGCGGTGCTTGAACTGGGTTATCT
GCCTGCTGGGACTGGTTATACTTCTCTGCTGCCTGAAAGCAAGCTTTCTA
GACCAT

BO34318.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG43062-RA 525 CG43062-PA 1..522 17..538 2610 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG43062-RA 584 CG43062-RA 41..564 15..538 2620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11750373..11750896 15..538 2620 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:50:57 has no hits.

BO34318.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:30 Download gff for BO34318.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 43..564 17..540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:09 Download gff for BO34318.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 43..564 17..540 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:09 Download gff for BO34318.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11750375..11750896 17..540 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:30 Download gff for BO34318.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7576097..7576618 17..540 99   Plus

BO34318.pep Sequence

Translation from 16 to 556

> BO34318.pep
MGISPQCWPIKNKTFVFLCRGIHERRSKKKTLSTYYTLPHYHNQDENHKY
AFFHVENDSRVFFITIGRSRLNNLDWFLVDKWGKFIRNGTSVYDYHTGFE
CVYKRIHFLERLLKECLAKQNSTQRNSTNPELMVLHFPETKAPTYHMVSI
GDNTRCLNWVICLLGLVILLCCLKASFLDH

BO34318.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG43062-PA 174 CG43062-PA 1..174 1..174 967 100 Plus