BO34322.complete Sequence
856 bp assembled on 2013-09-16
GenBank Submission: KX794965
> BO34322.complete
GAAGTTATCAGTCGACATGTGGTCTCGTAAGCTCCTTACTTTTCTGTTGA
CAATAACCACTTTACATCCAACAATCCAAGCCGCCTCCGTAGGCCAGGAA
TGTGGGATATTTAATGAGAAGCAGTACAATAGTGACAATATCATTGCGGA
GCCTACCGAACATCCTTGGGTTGTGCGGATCGTAGGAGTGACTAAGGATG
GCAGCAACACATTGCTCTGCACTGGCATTCTTATCGATTCCAGACGCGTT
GTGACCGCAGCTCACTGTGTTTCAAAGGATGAATCGGAAAGCATTTATGG
CGTTGTCTTCGGGGATTCCGACTCTAGCAATATCAATCTTGTCAGCGCAG
TCACTGTCCATCCAGATTACTCACCTAGGAAATTCGAAAACGACTTGGCC
ATAATAGAGCTGACCAAGGAGGTGGTGTTTTCAGACTTGGTTCAACCAAT
TTGCTTGCCTTCAGTATCCGAAATGGTTCCAGGAAGTGAAACCTCCAATT
CAAAGCTTATCGTTGCCGGACTGGAGGGACCGTCATTCGACCGAAGGCAT
TCGGCAACTCAAAGGTTAGACAAACGCATTAAAATGACATACACTAAAAT
TGACAGCAAGGAGTGCCATGAGAAGCAAGCCCGCTTTCCGGAGGAACTGA
TCTGTGGCCACACCGAGAGGAGTCCTCTTTCAGGATCAGCTTTGACCGAG
GCTTCGGGTACTCCACGCCAATTTCATCTGTTGGGAATTGCGGTTGCTGG
ATTCTTCTCGTCTGACCTAGATCACCAAGGGTACTTAAACATTCGACCCC
ATCTAGATTGGATTTCGAAGAATTCCTCAAAGTTAAGAGCAAGCTTTCTA
GACCAT
BO34322.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:50:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31205-RC | 825 | CG31205-PC | 1..822 | 17..838 | 4110 | 100 | Plus |
| CG31205-RB | 825 | CG31205-PB | 1..822 | 17..838 | 4110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:50:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31205-RC | 1020 | CG31205-RC | 31..852 | 17..838 | 4110 | 100 | Plus |
| CG31205-RB | 917 | CG31205-RB | 31..852 | 17..838 | 4110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:50:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20731773..20732539 | 72..838 | 3835 | 100 | Plus |
| 3R | 32079331 | 3R | 20731661..20731715 | 17..71 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:50:40 has no hits.
BO34322.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:25 Download gff for
BO34322.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31205-RB | 31..852 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:04 Download gff for
BO34322.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31205-RB | 31..852 | 17..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:04 Download gff for
BO34322.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20731661..20731715 | 17..71 | 100 | -> | Plus |
| 3R | 20731773..20732539 | 72..840 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:25 Download gff for
BO34322.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16557383..16557437 | 17..71 | 100 | -> | Plus |
| arm_3R | 16557495..16558261 | 72..840 | 99 | | Plus |
BO34322.pep Sequence
Translation from 16 to 856
> BO34322.pep
MWSRKLLTFLLTITTLHPTIQAASVGQECGIFNEKQYNSDNIIAEPTEHP
WVVRIVGVTKDGSNTLLCTGILIDSRRVVTAAHCVSKDESESIYGVVFGD
SDSSNINLVSAVTVHPDYSPRKFENDLAIIELTKEVVFSDLVQPICLPSV
SEMVPGSETSNSKLIVAGLEGPSFDRRHSATQRLDKRIKMTYTKIDSKEC
HEKQARFPEELICGHTERSPLSGSALTEASGTPRQFHLLGIAVAGFFSSD
LDHQGYLNIRPHLDWISKNSSKLRASFLDH
BO34322.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31205-PC | 274 | CG31205-PC | 1..274 | 1..274 | 1419 | 100 | Plus |
| CG31205-PB | 274 | CG31205-PB | 1..274 | 1..274 | 1419 | 100 | Plus |
| CG31199-PA | 293 | CG31199-PA | 4..289 | 5..273 | 215 | 27 | Plus |
| CG9372-PA | 408 | CG9372-PA | 180..406 | 44..270 | 207 | 28.3 | Plus |
| CG31200-PA | 284 | CG31200-PA | 26..282 | 29..269 | 188 | 26 | Plus |
