BO34329.complete Sequence
1252 bp assembled on 2013-09-16
GenBank Submission: KX798382
> BO34329.complete
GAAGTTATCAGTCGACATGCTTAAAAGCTGTCATTTAAACTACTGCTATG
GCATTTTGATTAGCCTTTTCATTTTCTGTGATACCGCTTCCGGCGATTTG
ATTAAGGTCGACAAAACTATATTGGAGGATGCCAATCTGATCACGCCGGA
TTTGATCAAGAAGTATGGTTATCCTGCTGAAACGCATAAGATCCAGGCCA
AGGATGGCTTCGTCCTTACGGCTCATCGGATTCCCAAGCCCGGAGGACAA
CCCGTGTTATTGGTACATGGCCTGCTGGACAGCTCGGTGGCATATGTGAT
ACTGGGTCCCGAAAGATCCTTGGGCTTCCTGCTTAGCGATATGGGATACG
ATGTTTGGTTGCTAAACACGCGGGGAAATAGGTATTCCCGGAAGCACAAG
CGATATCATCGATACCAGCCGCAGTTCTGGGACTTCTCCTTCCATGAGCT
CGGAGTGTACGATCTTCCGGCGGCCATTGATTACGTTCTTGCAAGGAGCA
AGGACTTCGAACAGATCCACTATGTGGGCCACTCACAGGGAACTACATCC
TTCTTTGTGATGGGCAGTGAGAGATCGGCCTATATGAAAAAGATCAAACT
TATGCAGGCTCTGGCTCCGGTTGTCTTTTGGGACTACATCGATTCACCGA
TTATACTCACTTTTGTGAAGTATTTGAGACCATTAGTGTTTATTGCCAGA
TCGTTTGGAATATACGAATTTCCGCCGGAGAACGAAGTGTGGCGAAGCCT
GATACATAAGATCTGCAGCTTCGTCTTCCAGAATACCTGCACCTATTTCC
TGATGGAAGCCATGGGCGTGGACTACGCACAATTCAACTCCAGCCTTCTT
CCGCTCTTCACGGGACATGCATCCTCCGGATCATCGGTTAAGTCTCTGGA
GCACTATGGCCAGCAGATCCACAGCGGTGGGTTTTTCAAGTACAATTACT
ACAGCACCTGGGAGAATCGAAGAAACCACGGCGTCGACACTCCGCCACAG
TACAAACTCACTAATGTCGACTGCAAAGTGGCATTGTACTACAGTAGAAA
CGATCGTCTAACATCCGACAAGGATGTGGTTCGATTACGTGATATCCTGC
CAAATGTAGTGCTCGATTACATGTTTCCCGATCCTTTGTACAACCACATC
AACTTCATTTGGGGAAATGATGTGAAAACCGTTCTCAACGATCGCATGAT
AGAACTAATGCGAAAAGTTGACAATGGCGAAGTGGCAAGCTTTCTAGACC
AT
BO34329.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:51:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18302-RA | 1221 | CG18302-PA | 1..1218 | 17..1234 | 6090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18302-RA | 2144 | CG18302-RA | 652..1869 | 17..1234 | 6090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:51:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10535766..10536312 | 688..1234 | 2735 | 100 | Plus |
| 2L | 23513712 | 2L | 10535160..10535703 | 145..688 | 2720 | 100 | Plus |
| 2L | 23513712 | 2L | 10534973..10535101 | 17..145 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:51:15 has no hits.
BO34329.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:36 Download gff for
BO34329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18302-RA | 652..1869 | 17..1236 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:15 Download gff for
BO34329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18302-RA | 652..1869 | 17..1236 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:15 Download gff for
BO34329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10534973..10535101 | 17..145 | 100 | -> | Plus |
| 2L | 10535161..10535703 | 146..688 | 100 | -> | Plus |
| 2L | 10535767..10536312 | 689..1236 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:36 Download gff for
BO34329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10534973..10535101 | 17..145 | 100 | -> | Plus |
| arm_2L | 10535161..10535703 | 146..688 | 100 | -> | Plus |
| arm_2L | 10535767..10536312 | 689..1236 | 99 | | Plus |
BO34329.pep Sequence
Translation from 16 to 1252
> BO34329.pep
MLKSCHLNYCYGILISLFIFCDTASGDLIKVDKTILEDANLITPDLIKKY
GYPAETHKIQAKDGFVLTAHRIPKPGGQPVLLVHGLLDSSVAYVILGPER
SLGFLLSDMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDL
PAAIDYVLARSKDFEQIHYVGHSQGTTSFFVMGSERSAYMKKIKLMQALA
PVVFWDYIDSPIILTFVKYLRPLVFIARSFGIYEFPPENEVWRSLIHKIC
SFVFQNTCTYFLMEAMGVDYAQFNSSLLPLFTGHASSGSSVKSLEHYGQQ
IHSGGFFKYNYYSTWENRRNHGVDTPPQYKLTNVDCKVALYYSRNDRLTS
DKDVVRLRDILPNVVLDYMFPDPLYNHINFIWGNDVKTVLNDRMIELMRK
VDNGEVASFLDH
BO34329.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18302-PA | 406 | CG18302-PA | 1..406 | 1..406 | 2178 | 100 | Plus |
| Lip4-PA | 434 | CG6113-PA | 59..431 | 31..403 | 915 | 46.4 | Plus |
| Lip4-PC | 448 | CG6113-PC | 73..445 | 31..403 | 915 | 46.4 | Plus |
| Lip4-PB | 432 | CG6113-PB | 59..429 | 31..403 | 909 | 46.7 | Plus |
| CG31871-PA | 531 | CG31871-PA | 71..439 | 35..403 | 881 | 45.8 | Plus |
