Clone BO34334 Report

Search the DGRC for BO34334

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:34
Vector:pDNR-Dual
Protein status:BO34334.pep: Imported from assembly
Sequenced Size:1471

Clone Sequence Records

BO34334.complete Sequence

1471 bp assembled on 2013-11-20

> BO34334.complete
GAAGTTATCAGTCGACATGGCCAGTCATCGAATCATCCAATCTGTCATGT
ACGCCGGCAATTTCACCAGCTCAGAATCCGGTTGGCTAATTGGGCAGGAG
CACGGAATGCAGCATAGCGATGAGTGCATCTTCCAGAGACGAAGGCCCAC
AGTTGTGCTCTTTGTGCTCTACGGACTGGCCGTGCCCACCTTGTCGGCCT
TTGGACTGTGTACGAACTTTATCAACGCCGTGGTATTCATGCGTCCCAAG
ATGACGCCATCGGCCTTCAGTTACCTGGCGGCCCTTTCGTGGATGGACTG
CATCTCATGCCTGCTCATCACAATGACTGCCCTGTCCAGGAGCTATTTCT
ACAGCAGTCCCACATGGATTACCTACGACTATCAGTGGCAAACGCCACTC
TTTGGCATCAGCACTGGCGGAGCGAACCTGATTCTAGCGTGTCTGAGCCT
GGATAGATTCATCTATCTGTCCTGTTTTAAAAGGAACAACGGTGCTCCGC
GATTTTGTCGCCGAAAGGTGGCTCGCTGCATCATTGTTGTGGCAATAGGC
ATATCCATCGTGGTCAATATGCCATACTTTTTCGTCTTCTACGTGAGTGA
CTCGGGAACTTGTCACGTCACAGAATTCTACTACACAAATTTTTATAAAG
TTCAAAACTGGTTCACCTTCGCCTTGTTGGCCCTCCTCCCAGCCATATTT
CTGGTCATCGGCAATGGGGCCATTATTATAGCCTTCCGGAAATGGACGAA
GCAAAGTCGTATATGCCAGGCTAACAACCCCGCTGCTAATAGCCGCACCA
CTGCCAAGCGATATCAGCACCAAATGAAGTTGACCATCAGCATAGTGATT
GTGATTACATTGTACCTCTTCGGCGAACTTCCCGCACACATGACGTCCAG
AAAGAGCTCCTTAAACCTTTTATTCGGTGGTGATGCCAACAAGGTGGATG
ACTCCTTCATTGAGCAGCTGGAGGTGATCTGCATAACATTGAATGCACTG
CAGTTGTCCCTGAACATAGTTGTCTACGCCGTGATCAATCCATCGTTTAT
GCCGGAGTTTTTCCTGTGTCTTAAGGGAACCTCCGATGTGTGCTTCGGTT
TGTGTTGTTTCCGGGCTGTAAGAAGGACATGGAGACGCTGCCAGGACAAG
AGAAAGCAGAAGGCCACAGCAGAGGAGCGGGTGGTGAGCAGTGTGACTCC
ACAACATCTGCCACCAGATGAGGCATTGCCCTGCGGTTGCGAGAGTTGGG
CCAGTGACTCCAGCTGCAAAATCAATGCCCATTGCAAGACGGCAGTGGGA
ACATTCACCATGAAGGATTCCGAGCAGGACGAAGGAAGTCATAGCCACCA
TGAGTCAGAGGTTTTCTACACCAGATCTAGTGCCTGCCTGCACTCAAAGG
ATTCCGCACCAGACGAGGAATCCATATTCAGTTCTAGCTTTATAATTATA
ACTGCAAGCTTTCTAGACCAT

BO34334.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15614-RA 1410 CG15614-PA 1..1407 47..1453 7035 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15614-RA 1524 CG15614-RA 13..1451 15..1453 7195 100 Plus
CG34190-RA 1100 CG34190-RA 397..1035 1453..815 3195 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16946520..16947158 815..1453 3195 100 Plus
2R 25286936 2R 16945567..16946191 15..639 3125 100 Plus
2R 25286936 2R 16946257..16946434 640..817 890 100 Plus
Blast to na_te.dros performed 2014-11-28 14:35:29
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 8163..8205 1139..1181 116 74.4 Plus

BO34334.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-20 11:38:35 Download gff for BO34334.complete
Subject Subject Range Query Range Percent Splice Strand
CG15614-RA 15..1451 17..1455 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:17:46 Download gff for BO34334.complete
Subject Subject Range Query Range Percent Splice Strand
CG15614-RA 15..1451 17..1455 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:17:46 Download gff for BO34334.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16945569..16946191 17..639 100 -> Plus
2R 16946257..16946434 640..817 100 -> Plus
2R 16946523..16947158 818..1455 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-20 11:38:35 Download gff for BO34334.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12833074..12833696 17..639 100 -> Plus
arm_2R 12833762..12833939 640..817 100 -> Plus
arm_2R 12834028..12834663 818..1455 99   Plus

BO34334.pep Sequence

Translation from 16 to 1471

> BO34334.pep
MASHRIIQSVMYAGNFTSSESGWLIGQEHGMQHSDECIFQRRRPTVVLFV
LYGLAVPTLSAFGLCTNFINAVVFMRPKMTPSAFSYLAALSWMDCISCLL
ITMTALSRSYFYSSPTWITYDYQWQTPLFGISTGGANLILACLSLDRFIY
LSCFKRNNGAPRFCRRKVARCIIVVAIGISIVVNMPYFFVFYVSDSGTCH
VTEFYYTNFYKVQNWFTFALLALLPAIFLVIGNGAIIIAFRKWTKQSRIC
QANNPAANSRTTAKRYQHQMKLTISIVIVITLYLFGELPAHMTSRKSSLN
LLFGGDANKVDDSFIEQLEVICITLNALQLSLNIVVYAVINPSFMPEFFL
CLKGTSDVCFGLCCFRAVRRTWRRCQDKRKQKATAEERVVSSVTPQHLPP
DEALPCGCESWASDSSCKINAHCKTAVGTFTMKDSEQDEGSHSHHESEVF
YTRSSACLHSKDSAPDEESIFSSSFIIITASFLDH

BO34334.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:46:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15614-PA 469 CG15614-PA 1..469 11..479 2484 100 Plus