Clone BO34338 Report

Search the DGRC for BO34338

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:38
Vector:pDNR-Dual
Associated Gene/TranscriptCG14971-RA
Protein status:BO34338.pep: Imported from assembly
Sequenced Size:1441

Clone Sequence Records

BO34338.complete Sequence

1441 bp assembled on 2013-09-16

GenBank Submission: KX798273

> BO34338.complete
GAAGTTATCAGTCGACATGGTGGCGGCCAAGTACGAGCGGCTGAATACCA
GTGGTGAGGCGGCCGGGAACGGAAATGGGAATGCCAGCGATGCAGAAGAC
GAGGAGATCGAACTCCATTTGGCGCAGAAGACGCAGCTGGGTAATGGCCA
TCGGTTGCGCCAGAGCAACTTCAAGTACGCCAGCGGAAAGTGCGGGTCCG
GAGAGGCGCCGTGCACCAACGAAACGGCCACGTTGGCCCAGGAGAACATG
ATGATGCAAATGGCCGTTGGTACACTGGCCATTATCTTCCTGTATCTGGC
ATTATCCATATCGCTGACATTCTACCAAACGGACATCAACCGGCAGATGC
CCTTTCCCCTGGCCATCGTAACCTATCATTTGGTTGTGAAGTTCCTTCTG
GCCGCCGCGGCGCGCAGAATCTACAGGATGCGAGTGGGCCGATCGCGGGT
TCAGTTGGATTGGAGGCTCGCCCTGCGGAAAATGGCACCCACGGGAGTTG
CCAGTGCCATCGACATTGGATTCTCCAACTGGGGCCTGGCCCTGGTGCCC
ATTTCCCTCTACACCATGACCAAGTCCTCGACCATTGTCTTCATCCTGCT
GTTCGCCATCGCTTTTGGACTGGAGAAGAAGAGCTGGTATCTGGTCTCGA
TTGTGGGCCTGATAGGCACTGGCCTTCTGATGTTCACCTACAAGTCAACG
GACTTCAATGCCCTTGGTTTCTTCTTCATCCTTTTCGCCTCGCTGAGCAG
CGGACTGCGATGGAGTTTCGCGCAGTTCATAATGCAGAAATCGAAGCTAG
GCTTGCACAATCCCATCGATATGATATATTACATGCAGCCGTGGATGATT
GCCTCGCTGGTGCCCCTCGTAATTGGAATCGAAGGTGCCGGGCTCATCGC
GGTAATAGAAGATCTGCACAACCACACTTCGAATGAGATAACTTGGGCCA
TTGCGAGGATATCAGCGGGCGCTTTGCTGGCTTTTCTCATGGAGTTCAGC
GAATTCTTGGTGCTCTGCAAGACCTCCAGTCTGACGCTCTCGATAGCCGG
CATTTTCAAGGATATCTGCCAGTTGGCACTAGCCGTGACTATCAGGAAGG
ACCACCTGAGTGTCATCAACTACATTGGCTTGATCATTTGCCTGGCTGGT
ATCGTTTGCCACCTACTGCACAAGTACTCCAATATGAAGGAGATGCAGCG
GCAGCAGGAGTTGCAGCTCGATAACGACCAGGAGGAGTCGTCGCCAGGGG
AGTACAAATTCAACGATGGCAGTGCCATTGTGGGTGTCCATGTGAAGTCG
CACTCCACGCTGACGGTGCCATTGCTGGAGCAAACCGACTCGGAGGACGA
GTCTGGTGCAAGCAACAAACAGAACGCCTCCGATGTGATCTTCGACGTGC
TGAAGCGACGCGACATGCAGCGAGCAAGCTTTCTAGACCAT

BO34338.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14971-RA 1410 CG14971-PA 1..1407 17..1423 6930 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14971-RA 2419 CG14971-RA 252..1658 17..1423 6930 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3470388..3471002 631..17 3000 99.2 Minus
3L 28110227 3L 3468784..3469324 1423..883 2675 99.6 Minus
3L 28110227 3L 3469381..3469637 886..630 1285 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:51:29 has no hits.

BO34338.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:42 Download gff for BO34338.complete
Subject Subject Range Query Range Percent Splice Strand
CG14971-RA 252..1658 17..1425 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:19 Download gff for BO34338.complete
Subject Subject Range Query Range Percent Splice Strand
CG14971-RA 252..1658 17..1425 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:19 Download gff for BO34338.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3468781..3469322 885..1425 99 <- Minus
3L 3469383..3469635 632..884 100 <- Minus
3L 3470388..3471002 17..631 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:42 Download gff for BO34338.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3468781..3469322 885..1425 99 <- Minus
arm_3L 3469383..3469635 632..884 100 <- Minus
arm_3L 3470388..3471002 17..631 99   Minus

BO34338.pep Sequence

Translation from 16 to 1441

> BO34338.pep
MVAAKYERLNTSGEAAGNGNGNASDAEDEEIELHLAQKTQLGNGHRLRQS
NFKYASGKCGSGEAPCTNETATLAQENMMMQMAVGTLAIIFLYLALSISL
TFYQTDINRQMPFPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWR
LALRKMAPTGVASAIDIGFSNWGLALVPISLYTMTKSSTIVFILLFAIAF
GLEKKSWYLVSIVGLIGTGLLMFTYKSTDFNALGFFFILFASLSSGLRWS
FAQFIMQKSKLGLHNPIDMIYYMQPWMIASLVPLVIGIEGAGLIAVIEDL
HNHTSNEITWAIARISAGALLAFLMEFSEFLVLCKTSSLTLSIAGIFKDI
CQLALAVTIRKDHLSVINYIGLIICLAGIVCHLLHKYSNMKEMQRQQELQ
LDNDQEESSPGEYKFNDGSAIVGVHVKSHSTLTVPLLEQTDSEDESGASN
KQNASDVIFDVLKRRDMQRASFLDH

BO34338.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14971-PA 469 CG14971-PA 1..469 1..469 2375 100 Plus