BO34341.complete Sequence
1033 bp assembled on 2013-09-16
GenBank Submission: KX799116
> BO34341.complete
GAAGTTATCAGTCGACATGCAGTACTCCTATCTACTGGCAATCTGTGTCA
GCTTGCTGCTTCTGAAGCTGAAGGGAGCAGCTGCCACTTCTTTATCCGCC
GAACCGACTCCGGAACTTTTGAATGCGGCCAAGCAAATAGGTTTAGATGA
AGTTGGCTTGCGAGAAATGTGGCACAGCCAGCAGCCGCTGGTTATCAGAA
CTCAAAACGATGCTGGTCAAGTCACCACTTTGACCTATGAGTTAGGTCCG
GATTTCAGATCGATTTTAAGACGCAAGGTCTCAGAGGGAATACTGCCTGC
TAGGCTAGAGGATAATTCAGGCTCTAAGCCCCAGCAAGATTGGGAGTATG
TGCCGAGTGCCGGTCGTCAGTTCCGTCCCATTGGAGATTCCAACTTCGGT
ACAGGTAATTTCGAGACAAAGATATTTAGCACTGAATTTCCGAGATTTCC
GAATTGGGAGCTGCCAGCGGGAGTTACTCCGAAAGTTACAACCAAGACGG
AAACGGATAGCTCGGGACGCAAGGTGACCACCACAACTAGAACTTATAGC
GGCATTCTGGTCCCAGGCAGTAATGTATTCAAGCAGATATTCCCCGACAT
CTCCAGAGAGCCTGGTCCAATTAACACAGACTCAAACCATCCAGCCGAGA
ATCCTAACACCTCAGTCTTTTCCCCATCTCGTTCCCCATCTACTGGACCT
ATTGATTTCAACTATGTATATAATTCCCGACCAAGCCAAAGGGAACCCGT
CTTTGTGCCAGTGATTGACTCAACCACCACGCAGCGGACTTCAGTTCCCC
GGTTCAGTTCAGCATTACCAAGAGACGACGGATCAGATCGAGTCATAGAT
GATTATTTGAAACAAGTGAATCTGAGTGCCTCAGAAATTGAGAATTCGAA
TGGTGAAGTGGTCAAGACTATTGTGGATAAGAATGGCAGAATTCTAACTG
CCAGATTTGTTCTAAGCTCAGTCAAAGGAACCAACGAAGGATCTCAGCAG
CAGAGGCCGACCAAGGCAAGCTTTCTAGACCAT
BO34341.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:51:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15293-RC | 1002 | CG15293-PC | 1..999 | 17..1015 | 4995 | 100 | Plus |
| CG15293-RA | 1002 | CG15293-PA | 1..999 | 17..1015 | 4995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:51:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15293-RC | 1337 | CG15293-RC | 197..1195 | 17..1015 | 4995 | 100 | Plus |
| CG15293-RA | 1180 | CG15293-RA | 40..1038 | 17..1015 | 4995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:51:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14108199..14109142 | 1015..72 | 4720 | 100 | Minus |
| 2L | 23513712 | 2L | 14109194..14109251 | 74..17 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:51:35 has no hits.
BO34341.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:44 Download gff for
BO34341.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15293-RA | 54..1052 | 17..1017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:20 Download gff for
BO34341.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15293-RA | 40..1038 | 17..1017 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:20 Download gff for
BO34341.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14108197..14109140 | 74..1017 | 99 | <- | Minus |
| 2L | 14109195..14109251 | 17..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:44 Download gff for
BO34341.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14108197..14109140 | 74..1017 | 99 | <- | Minus |
| arm_2L | 14109195..14109251 | 17..73 | 100 | | Minus |
BO34341.pep Sequence
Translation from 16 to 1033
> BO34341.pep
MQYSYLLAICVSLLLLKLKGAAATSLSAEPTPELLNAAKQIGLDEVGLRE
MWHSQQPLVIRTQNDAGQVTTLTYELGPDFRSILRRKVSEGILPARLEDN
SGSKPQQDWEYVPSAGRQFRPIGDSNFGTGNFETKIFSTEFPRFPNWELP
AGVTPKVTTKTETDSSGRKVTTTTRTYSGILVPGSNVFKQIFPDISREPG
PINTDSNHPAENPNTSVFSPSRSPSTGPIDFNYVYNSRPSQREPVFVPVI
DSTTTQRTSVPRFSSALPRDDGSDRVIDDYLKQVNLSASEIENSNGEVVK
TIVDKNGRILTARFVLSSVKGTNEGSQQQRPTKASFLDH
BO34341.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15293-PC | 333 | CG15293-PC | 1..333 | 1..333 | 1717 | 100 | Plus |
| CG15293-PA | 333 | CG15293-PA | 1..333 | 1..333 | 1717 | 100 | Plus |
| CG31769-PA | 311 | CG31769-PA | 1..295 | 1..318 | 226 | 26.2 | Plus |
