Clone BO34344 Report

Search the DGRC for BO34344

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG6184-RA
Protein status:BO34344.pep: Imported from assembly
Sequenced Size:3001

Clone Sequence Records

BO34344.complete Sequence

3001 bp assembled on 2013-11-09

GenBank Submission: KX794626

> BO34344.complete
GAAGTTATCAGTCGACATGATCAAACTGCGGCCATATGTGCCCTCCAAGA
GGATTGCCATACGGGACTCGTCCATCGACGAGGATGCGAGCGACGATGTG
GAGGACGAGGTGTTCATCAAGGATGCCAGGTCGGCGAAGCGCAGCGAGGA
GCAGGGATTGAAGCGGCCCCTGATGGCGCCGCGTCGCAAACACAGTCCAG
GTTCCGGACCCGGATCCGGCTCGGGATCAACTCCGATAATGAAGCAGCAC
AGGAGGCGGCGCTGCTGCCGCTGCTGCGAACCCTTCTGCTACGCCCTGGC
CGCTCTAACGGTACTGTGCGCCCTGCTCAGCCTGGCGGCCCTCATGCTGA
CGCTCTTCCCGCTGCCGCTGCAGCGAATCCGGCACTGGTGGCGCCCCGAT
CCCGCCCAGCTGGCGGCCATCTCAGCAGGCTCCTCCCGCATCTCATATGG
CAGCTCGCTGGGCAGTGAGTTTGTTCCCTGCACCCAGATCAGTGTCCAGA
AGCGCTGGTCTCGCAGCTTGGCGCGCATGAACAGCGAGAGTCCGCTGCGA
GCGGCTGATCTGAATGGCGATGGCATCAAGGACGTGGTCTTTGGCTATGG
AGTGGACGACAACATACCCTACGAGGGCATACCCTTGCCGCGCTGCCAGT
GCGCCCAGCAAGGGGAGGAGGTGCCCTGCGAGGGCGGCGTGGTGGCCTTG
AACGGACTGGACGGATCCATTCTCTGGCAATCGTGGAGCGTGGCGAATGT
CTTCTCGCTGCACTGCAGCGCGGATGTGGACGGAGATGGGGGCACCGATT
GCGTGGCAGCTGGTAGATTGGGAATGATTTACGCCATCAATGGACGCACT
GGCTCCGTAATCTGGAGCTTCCGGGAACTGGAAGTGGAAACAAACTCGCC
CATTGTAATGGATCTGTACACGATTAATGTGCTGCGCGATCTGGATGGTG
ATTCGGTGCCGGAAGTTATAGCCGCCCATCTGGAGGAGCGCGAGGAGTCC
AAGGCGGGACACATAAAGCTGATTTCGGGCAAGACGGGCAAGGTAATCCG
GAGCATTCCAACGCCGTACCGCGAGGAGATGTTCGTGCCCATTCAGCTGA
TCACGCAGGCGGATGGCACGGAGCTCCTACTGATTGTCACCGGCGGGCAG
AACACTCCAGGTGGCATTTACTCCTTGCGACTGCACTCCCTAATGGCGCA
CACCAGTGAGAAGCACTTCACCCCGCTCCATCGTCAACAGGGCTCGGGTC
TGATGGTGCCCGCCGTGCTAACCGATCTAAATGGCGATGGTATCTCGGAT
GTTGTGGTGGCCGCCTTTAATCGGAGCGTTCTAGCCTTCGATGGAGCCAA
CTACACCATGATGTGGAACTACACGTTCCCGGCCAGCGAGTGCGTCAGTG
CCATTGTCCCGGGTCTATTTAATCACGACAGGGTCACGGATTTCATGGTG
AAGTACAACACTGGACCGGGATTCCCGGTATACTACTACTCGCAAACCAC
CATCCTGGACGGACGAAACGGACAGCCCCTGCTGAACGCCATGATGACGG
ATGCAGGTGGTGCCAATAGTCTTCTCGGCGGCGTCTCCATTTCGCAGAGC
TTCGGAGGCGACTTCTTCTTGCACTGGCAGCTGCAGTGCCGCAACCGTCC
GGATGCCCGGGATGCCTACGAATTTGTGCCGGATAGCGACATTATACTCC
AAGCCAGGGCGGACACCTGTCGTCTGCGTTACAACGAGTCCACGATGCTG
AAGCTCTACGGGATTGCCAGGCACATCGAACCACCGGGTGCGGTCCTCTT
TAGCACCGATGACTTGGAGGTGCAGCTGAATCGCACACAACGACCGGCGG
CAGCAGGAAAGAAATCCCCACTGAAGCATCCCAAGCTGCTCAAAAAACTG
CTGGCCGGAAACAGGGAGCAACTGCTGCGCCAGGTGGCCGCCGGATCGGA
AATTGGCAATGAAAATGGTATAGGTAGTGGGACGGAGCACCCCAACCGTC
GCCTCAAGACACACCATCGACCCAATCCGCTGATGGAGCAGCAATTGCAG
GAACTTTTGCCTCAGGGAGCAGATAACGAATCACCTAACTTCGGAATGGC
AAGTGGTTACCCCAAGGAATTTAAGGACTACGATGCCCTACAACTGCCGC
CAGAGAATGCTAATCCGCTGCGCCTGCCGGAGGAGTACGAACTGGTGTAC
AACGACGAAGTGCCTCCGCTTTTAGAGCCCAGTGAACGTGAGCGACCCAT
TCACCTGCGCTCCAAATATCCCAGCGCCGGCAATCGGGATGTGCGCAGTG
GATTCCTCGAAGCCAGTGGCAGCAGCATCATAACCACCAGCCCTGCCACC
CCCAGCTCCACCGGACAACCCATGTCAGCTCAGTCCCCGCTGAGCCTGTG
GGATCTGGAGCTGGACAACGAGGCGCGGGAGCGAGCTGCGGACGCCCAGG
AGGAAAACAAAAAACAGAAGAAACGTCGCAAAAGACGCGAGAGTGCTTCC
GGAATCACGACAACAGCGTCCGAGGATTCCGCTGGTGTTGAGGAGTCCTC
CGTAGGAGCTGACTGGTACTTGGCTTCCATCTCATCCACCGGCGTTTTGC
TGAAAGCTCTGGGCAATGTCAGCTCCTCGCTGGACTTTGCCTTCGTCCTC
AACATCCGAGAATCGGAGGCCTATCCGCCACTCTTCTCTCCGCAGGATCT
CAGCTGCGTCGAGGAGAAAGTCAGTGCGTACAAGAGCTACACCATAGACA
ACTTACGCGTGCTGCGCAAACAGTTCCTGAAGCAGTGCCTCAGCGAGCGT
CTGGTGGACGCGGAGCCCACCCTACCCAAGTTCGAGTCGCAGCTGGTGGT
GACCCGCATCGGGATCACCTGCACCTGTCGCTCCCTGCGGCCGGGCGAGG
TTTGCTCGGAGCTGGATCCGGTGGAGTCGCAGCGCTGGACGGAGTTTATG
GGTAACTCGGGACATGGCTTCTATGCCAACCACGCAAGCTTTCTAGACCA
T

BO34344.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6184-RF 3090 CG6184-PF 121..3087 17..2983 14835 100 Plus
CG6184-RA 2970 CG6184-PA 1..2967 17..2983 14835 100 Plus
CG6184-RE 2922 CG6184-PE 74..2919 138..2983 14230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG6184-RF 3548 CG6184-RF 331..3297 17..2983 14835 100 Plus
CG6184-RA 3356 CG6184-RA 139..3105 17..2983 14835 100 Plus
CG6184-RE 3380 CG6184-RE 284..3129 138..2983 14230 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19653625..19654923 2122..824 6495 100 Minus
3R 32079331 3R 19654989..19655674 823..138 3430 100 Minus
3R 32079331 3R 19652950..19653563 2736..2123 3070 100 Minus
3R 32079331 3R 19652620..19652867 2983..2736 1240 100 Minus
3R 32079331 3R 19656205..19656327 139..17 615 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:33:30 has no hits.

BO34344.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-09 12:26:23 Download gff for BO34344.complete
Subject Subject Range Query Range Percent Splice Strand
CG6184-RA 162..3128 17..2985 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:16:59 Download gff for BO34344.complete
Subject Subject Range Query Range Percent Splice Strand
CG6184-RA 139..3105 17..2985 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:59 Download gff for BO34344.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19652618..19652867 2736..2985 99 <- Minus
3R 19652951..19653563 2123..2735 100 <- Minus
3R 19653625..19654923 824..2122 100 <- Minus
3R 19654989..19655672 140..823 100 <- Minus
3R 19656205..19656327 17..139 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-09 12:26:23 Download gff for BO34344.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15478340..15478589 2736..2985 99 <- Minus
arm_3R 15478673..15479285 2123..2735 100 <- Minus
arm_3R 15479347..15480645 824..2122 100 <- Minus
arm_3R 15480711..15481394 140..823 100 <- Minus
arm_3R 15481927..15482049 17..139 100   Minus

BO34344.pep Sequence

Translation from 16 to 3001

> BO34344.pep
MIKLRPYVPSKRIAIRDSSIDEDASDDVEDEVFIKDARSAKRSEEQGLKR
PLMAPRRKHSPGSGPGSGSGSTPIMKQHRRRRCCRCCEPFCYALAALTVL
CALLSLAALMLTLFPLPLQRIRHWWRPDPAQLAAISAGSSRISYGSSLGS
EFVPCTQISVQKRWSRSLARMNSESPLRAADLNGDGIKDVVFGYGVDDNI
PYEGIPLPRCQCAQQGEEVPCEGGVVALNGLDGSILWQSWSVANVFSLHC
SADVDGDGGTDCVAAGRLGMIYAINGRTGSVIWSFRELEVETNSPIVMDL
YTINVLRDLDGDSVPEVIAAHLEEREESKAGHIKLISGKTGKVIRSIPTP
YREEMFVPIQLITQADGTELLLIVTGGQNTPGGIYSLRLHSLMAHTSEKH
FTPLHRQQGSGLMVPAVLTDLNGDGISDVVVAAFNRSVLAFDGANYTMMW
NYTFPASECVSAIVPGLFNHDRVTDFMVKYNTGPGFPVYYYSQTTILDGR
NGQPLLNAMMTDAGGANSLLGGVSISQSFGGDFFLHWQLQCRNRPDARDA
YEFVPDSDIILQARADTCRLRYNESTMLKLYGIARHIEPPGAVLFSTDDL
EVQLNRTQRPAAAGKKSPLKHPKLLKKLLAGNREQLLRQVAAGSEIGNEN
GIGSGTEHPNRRLKTHHRPNPLMEQQLQELLPQGADNESPNFGMASGYPK
EFKDYDALQLPPENANPLRLPEEYELVYNDEVPPLLEPSERERPIHLRSK
YPSAGNRDVRSGFLEASGSSIITTSPATPSSTGQPMSAQSPLSLWDLELD
NEARERAADAQEENKKQKKRRKRRESASGITTTASEDSAGVEESSVGADW
YLASISSTGVLLKALGNVSSSLDFAFVLNIRESEAYPPLFSPQDLSCVEE
KVSAYKSYTIDNLRVLRKQFLKQCLSERLVDAEPTLPKFESQLVVTRIGI
TCTCRSLRPGEVCSELDPVESQRWTEFMGNSGHGFYANHASFLDH

BO34344.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG6184-PF 1029 CG6184-PF 41..1029 1..989 5163 100 Plus
CG6184-PA 989 CG6184-PA 1..989 1..989 5163 100 Plus
CG6184-PE 973 CG6184-PE 25..973 41..989 4963 99.9 Plus