BO34347.complete Sequence
325 bp assembled on 2013-09-16
GenBank Submission: KX799515
> BO34347.complete
GAAGTTATCAGTCGACATGAAGAAGCATTTGGAAGTGTTCTTGGTCGTGG
CATTAGCTGCTCTAGCGGAATTGCCAGGAGTTACAGCCTCGTCCGTGGAA
ATACTGTCCCATTGTGTCGCCTGTCCGGACGAATTTAGGGGCATGTTGGT
CTGCGCCTTTATCAACGGTTGCTACTTGGAAATAGAATACTGCTCCATGG
TGGTCTTCAACTGTGGACGCCAACAGCACCACAAACACTTGTTCCTAGTG
GTAAACGAGGGCAAGTGCAAGCCAGTTCGGGGCTACAAATGCGAGACCAT
GGATTTTGCAAGCTTTCTAGACCAT
BO34347.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:51:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12828-RA | 294 | CG12828-PA | 1..291 | 17..307 | 1455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:51:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12828-RA | 448 | CG12828-RA | 41..331 | 17..307 | 1455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:51:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7149415..7149637 | 239..17 | 1115 | 100 | Minus |
2R | 25286936 | 2R | 7149291..7149358 | 307..240 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:51:21 has no hits.
BO34347.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:37 Download gff for
BO34347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12828-RA | 41..331 | 17..309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:16 Download gff for
BO34347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12828-RA | 41..331 | 17..309 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:16 Download gff for
BO34347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7149289..7149358 | 240..309 | 97 | <- | Minus |
2R | 7149415..7149637 | 17..239 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:37 Download gff for
BO34347.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3036794..3036863 | 240..309 | 97 | <- | Minus |
arm_2R | 3036920..3037142 | 17..239 | 100 | | Minus |
BO34347.pep Sequence
Translation from 16 to 325
> BO34347.pep
MKKHLEVFLVVALAALAELPGVTASSVEILSHCVACPDEFRGMLVCAFIN
GCYLEIEYCSMVVFNCGRQQHHKHLFLVVNEGKCKPVRGYKCETMDFASF
LDH
BO34347.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12828-PA | 97 | CG12828-PA | 1..97 | 1..97 | 525 | 100 | Plus |