BO34350.complete Sequence
937 bp assembled on 2013-09-16
GenBank Submission: KX793973
> BO34350.complete
GAAGTTATCAGTCGACATGGCCGGGTCAGTTCGTGCGACGCTCCTGGGTC
TCCTCATGCAGATCCTGTGCAATGGGCTGGCTGGTCAGCAGCTGCTCCTC
ACACGTCCCCAAAGGAGCCTGTTCGAGACTCCGCTGGGTCACGTAGAGCA
AGTGGAACAAGTGCCCTCTTTAGGCTGGAATAGTGTTGGTAGTGGACTCG
GAGTGGGCGAGTGGCCCTACAGCCCCGTTGGTCTCGGCCACATGAGCAAG
GATGAGCTGCTGACCCTGCTGGAGGCCTGGAAGGAGGTCGAGGAGGAATC
GGCCACAACAACGACTGCGTCGCCAGCGGATGCCAGCACACGTAGACCTC
CTCCGCCTCCACTGCCACCACCACCACCTCCTCCGCCACGACCCACACCC
ATACCAGTCTCCGTTGCAATCCCGTCACCGGCTGTTCCGCCCTCCGGCAC
TCCCATTACAGTGCGGCTCCCAGCCTTTGTGCCTGTGCGTCTGGCTGCCG
TGTTTACTCCGCTTGCCGGTGGACAAGCTGATAGTGCTGTTCCGTCTGCC
AACGGAGTCGGAGGGGCTGGAGGAGATGATTTGTCCACCGATGACGTGAC
AGATGATGACGGCGTCTCTACCCGGCTCTTTCGCTTTTTGCCCATGCCAG
GAGCTCGAACGAGACCGCAATCCAATTCACAGCCCAGGCAGCAATTTGTG
GTGAGGAACACCCTGGACAGCGTGGATGCGGGCACTGCCCCTGTCAGGCA
GCAGATTAAACCGGAAGTCCAGCCCAAGGCGACTGCTCCGCCTTCCATTC
CCAAGTTCCCTGGCCACCCAACTCCCTTCTTCCGTCCCAGATTTGGTGTG
CCACCGAGTCTGGCCAACGCTCGATTCGAGCTGGTGCCCTCTTCCCAAAT
CATCGGCGACTGGCGGGTGGCAAGCTTTCTAGACCAT
BO34350.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:52:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13358-RD | 906 | CG13358-PD | 1..903 | 17..919 | 4515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:52:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13358-RD | 1427 | CG13358-RB | 24..927 | 16..919 | 4520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:52:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 804074..804898 | 840..16 | 4125 | 100 | Minus |
X | 23542271 | X | 803924..804004 | 919..839 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:52:17 has no hits.
BO34350.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:59 Download gff for
BO34350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13358-RD | 25..927 | 17..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:36 Download gff for
BO34350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13358-RD | 25..927 | 17..921 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:36 Download gff for
BO34350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 803921..804002 | 841..921 | 97 | <- | Minus |
X | 804074..804897 | 17..840 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:59 Download gff for
BO34350.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 697954..698035 | 841..921 | 97 | <- | Minus |
arm_X | 698107..698930 | 17..840 | 100 | | Minus |
BO34350.pep Sequence
Translation from 16 to 937
> BO34350.pep
MAGSVRATLLGLLMQILCNGLAGQQLLLTRPQRSLFETPLGHVEQVEQVP
SLGWNSVGSGLGVGEWPYSPVGLGHMSKDELLTLLEAWKEVEEESATTTT
ASPADASTRRPPPPPLPPPPPPPPRPTPIPVSVAIPSPAVPPSGTPITVR
LPAFVPVRLAAVFTPLAGGQADSAVPSANGVGGAGGDDLSTDDVTDDDGV
STRLFRFLPMPGARTRPQSNSQPRQQFVVRNTLDSVDAGTAPVRQQIKPE
VQPKATAPPSIPKFPGHPTPFFRPRFGVPPSLANARFELVPSSQIIGDWR
VASFLDH
BO34350.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13358-PD | 301 | CG13358-PB | 1..301 | 1..301 | 1584 | 100 | Plus |
CG42449-PB | 281 | CG42449-PB | 10..197 | 10..191 | 230 | 34.8 | Plus |
CG42449-PA | 310 | CG42449-PA | 10..197 | 10..191 | 230 | 34.8 | Plus |