BO34351.complete Sequence
1516 bp assembled on 2013-11-09
GenBank Submission: KX798616
> BO34351.complete
GAAGTTATCAGTCGACATGTTACGTCGAGGGCCAACGGGCTTCATATCCG
CCCTGATCTTCGCGAGCCTCTGTCTGGGCTTCTGTCGGGGCTACTTCAGT
CTGGAGGTGGGTGATCCCTGTCCCACGGTCAATTACCGCAGTCGCTGCCA
AGCGCTGGAGGATTGTGAGACTCTGGCGTCGCATCTTAAAACGGGACGAC
TCACATTGAGGGCGGTGATGAACTGTGGCTTCACCACGCGCAGCGAGAAG
ATCTGCTGTCCCGTCGAGGATGCCCAGAGCGAGGTGCGGTTAGATCCCAC
GGCGGCCACCACCAGTACAACTACAACTACTACTACTACCAGCACAACAT
CTACTACTACTTCCACCACAACCACCACTACTACCACAACTCCAGCGCCA
GAACCTTGGCTGAGCATATTCAAGACGGATCGCGATTACGTCCAGCAATC
CATTGGGTCCACGCACCGGCCAACGAGGGAGAGCATCACCTTCAGAGACA
CCTCCGATGGCGCCGACTGCACGGCTCCCCTGTACGAGGGCCAGTGTCGT
GCCGTATCCGCCTGCCCCAGTGTGGAGCCACTCCTGTCGCAGGGTCGTCT
CAGGGACGAGGATTTCACAACGTGCCGCGAGGGAACGCACGAGGAGATCA
TCTGCTGTCCGCTCAATCTGCCGCTGCAGCCACGCGTCCACACCGGCTTG
CGGCTGGGTGTCCAGGGTGATTCGTCGGAGGGCAAAGCTGCCGAGGATCC
GCTAGAGCTGGCCGCCATTGCACGGGCGGATAGGCTACTGCCACACTACC
GCCATCTGGCTTCGCTGGCACATCCGAATGCCGCCTTCGATGGCCACCTG
CATCACTGTGCCGCCCTGGTACTGACGCCCCAGCTCCTGGTCAGCGCCGC
TGGCTGCGAGCGACCAAGTCATGCTGTTTTCGGAGTGGCTGATCTGCGGG
ACGTTGACGCCGACGAGGACTATCTGGCGGATATAGTGCGCCTGGTTCAA
TTTCAAAAGGATCTATCACTTATACGATTGCAGGACCCACTGCGTCTGGG
CAGTCAGACCTCCGCGAATGTGAGCGTGGCTCCCATTTGCACCCAGTTCG
AGCTGACCAGGCTGCAGCGTAGCGGCAGCCTAGTGGCCGTGGGTTGGGGC
AAGGGTGAAGACACTGACTGTCCGCTGTTCGAGATGCCCATGCGACTGCG
TCCCACATGGGCCTGCGGGGATCTACCCAATTACGGCGGAGTTCAGGATC
TGGGCAGCTCACATCTTTGCGTGGAGCCGATGGACGGCGAAAGGGAGCTG
CAGCGGTTCTCCAACAGCAGCACCTGCGCCGCCTGTCCGGCTTCCGTGGG
CAGTGTACTCCATCTGGTGCGACCGGGCGGAGGTCGCTGCGTCATTGGGG
TTGCCACGCCCACGGGGGCTGAGTGCGAGGCACGGACCATGTACTTCACG
GGTCTGCTGAGTCCGCCGTTCAGGCGGTTTGTGGAGCAGGAGCAGAAGGC
AAGCTTTCTAGACCAT
BO34351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:33:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15046-RA | 1485 | CG15046-PA | 1..1482 | 17..1498 | 7410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15046-RA | 1817 | CG15046-RA | 135..1616 | 17..1498 | 7410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18488274..18489155 | 988..107 | 4410 | 100 | Minus |
| X | 23542271 | X | 18487651..18487990 | 1498..1159 | 1700 | 100 | Minus |
| X | 23542271 | X | 18488046..18488218 | 1160..988 | 865 | 100 | Minus |
| X | 23542271 | X | 18489396..18489486 | 107..17 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:33:35 has no hits.
BO34351.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-11-09 12:26:24 Download gff for
BO34351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15046-RA | 140..1616 | 22..1500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:17:01 Download gff for
BO34351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15046-RA | 140..1616 | 22..1500 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:17:01 Download gff for
BO34351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18487649..18487988 | 1161..1500 | 99 | <- | Minus |
| X | 18488046..18488217 | 989..1160 | 100 | <- | Minus |
| X | 18488274..18489154 | 108..988 | 100 | <- | Minus |
| X | 18489396..18489481 | 22..107 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-11-09 12:26:24 Download gff for
BO34351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18382079..18382250 | 989..1160 | 100 | <- | Minus |
| arm_X | 18381682..18382021 | 1161..1500 | 99 | <- | Minus |
| arm_X | 18382307..18383187 | 108..988 | 100 | <- | Minus |
| arm_X | 18383429..18383514 | 22..107 | 100 | | Minus |
BO34351.pep Sequence
Translation from 16 to 1516
> BO34351.pep
MLRRGPTGFISALIFASLCLGFCRGYFSLEVGDPCPTVNYRSRCQALEDC
ETLASHLKTGRLTLRAVMNCGFTTRSEKICCPVEDAQSEVRLDPTAATTS
TTTTTTTTSTTSTTTSTTTTTTTTTPAPEPWLSIFKTDRDYVQQSIGSTH
RPTRESITFRDTSDGADCTAPLYEGQCRAVSACPSVEPLLSQGRLRDEDF
TTCREGTHEEIICCPLNLPLQPRVHTGLRLGVQGDSSEGKAAEDPLELAA
IARADRLLPHYRHLASLAHPNAAFDGHLHHCAALVLTPQLLVSAAGCERP
SHAVFGVADLRDVDADEDYLADIVRLVQFQKDLSLIRLQDPLRLGSQTSA
NVSVAPICTQFELTRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWAC
GDLPNYGGVQDLGSSHLCVEPMDGERELQRFSNSSTCAACPASVGSVLHL
VRPGGGRCVIGVATPTGAECEARTMYFTGLLSPPFRRFVEQEQKASFLDH
BO34351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:44:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15046-PA | 494 | CG15046-PA | 1..494 | 1..494 | 2617 | 100 | Plus |
