Clone BO34354 Report

Search the DGRC for BO34354

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG34436-RA
Protein status:BO34354.pep: Imported from assembly
Sequenced Size:844

Clone Sequence Records

BO34354.complete Sequence

844 bp assembled on 2013-09-16

GenBank Submission: KX797903

> BO34354.complete
GAAGTTATCAGTCGACATGAATTTCGCATCTTGTCTTGCTGTGTTATCAT
GGATGCTGGCTAATCAGGGATCGGCACAGCTTCTTGACCAGAACTGTGCC
GAAGTTTCACGTCTTTCTAATGATATAATATTTAGTAGACCGTGGATGGC
ACTGGTCTTATTGCCCAATAAAACCTGCAGTGGCGCCCTGATTCACAAAT
ACTTTGTGATAACATCAGCAAGCTGTGTTTTCAATCAAGAGAGAGCCATC
GTCCGCTTGGGGCAGTTGAGCATTAAACAAGAGCATATTGTTAGTTATAG
CAGTGATGATTACCATGTGCAAAGTGCCTACATTCATAGGTTCTATGAGA
AAAGCAATTTCGAGCATGACATAGCTTTGCTGGAACTTCAGAACGATGTG
CTCTACAAGGCCCACATACGTCCAATTTGCCTTTGGTTAGACAAATCTGA
TATCGACACACAAATGTTTAAAAGATATGAAACATTCCGCTGGGGCATAG
ATGAGAAGTACATATTGCCTGCGGCCAAGACAAGCAAAATAAAACACATC
AGCCAAGTCAAGTGCGAAAATGCCTTCAAATTGTATCCGCAGAATTCGCA
TATCTGTGCTGGCTATAAGAACAAAAGCAAGTGCGTGGAAACAGGAAGTC
CCTTGTTTAAAAAGATACGCTATTACACAAAAATTCGTTACACTCTATTC
GGAATTCAGAGTTATGGCGAATCGAGGACGTGTTTATATACCGATGTGAC
GAAATACATTGACTGGATTATGGGAGTCATTCAAAATGTTAATGTGATAG
TGTCGAATGGGGAAAATAGCTACGCTGCAAGCTTTCTAGACCAT

BO34354.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:52:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG34436-RA 813 CG34436-PA 1..810 17..826 4050 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:52:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG34436-RA 853 CG34436-RA 7..816 17..826 4050 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28282932..28283511 247..826 2900 100 Plus
3R 32079331 3R 28282586..28282769 17..200 920 100 Plus
3R 32079331 3R 28282830..28282875 201..246 230 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:52:27 has no hits.

BO34354.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:04 Download gff for BO34354.complete
Subject Subject Range Query Range Percent Splice Strand
CG34436-RA 7..816 17..828 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:40 Download gff for BO34354.complete
Subject Subject Range Query Range Percent Splice Strand
CG34436-RA 7..816 17..828 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:40 Download gff for BO34354.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28282586..28282769 17..200 100 -> Plus
3R 28282830..28282875 201..246 100 -> Plus
3R 28282932..28283511 247..828 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:04 Download gff for BO34354.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24108308..24108491 17..200 100 -> Plus
arm_3R 24108552..24108597 201..246 100 -> Plus
arm_3R 24108654..24109233 247..828 99   Plus

BO34354.pep Sequence

Translation from 16 to 844

> BO34354.pep
MNFASCLAVLSWMLANQGSAQLLDQNCAEVSRLSNDIIFSRPWMALVLLP
NKTCSGALIHKYFVITSASCVFNQERAIVRLGQLSIKQEHIVSYSSDDYH
VQSAYIHRFYEKSNFEHDIALLELQNDVLYKAHIRPICLWLDKSDIDTQM
FKRYETFRWGIDEKYILPAAKTSKIKHISQVKCENAFKLYPQNSHICAGY
KNKSKCVETGSPLFKKIRYYTKIRYTLFGIQSYGESRTCLYTDVTKYIDW
IMGVIQNVNVIVSNGENSYAASFLDH

BO34354.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG34436-PA 270 CG34436-PA 1..270 1..270 1429 100 Plus
CG34437-PA 266 CG34437-PA 1..266 1..275 537 42.5 Plus
CG33465-PC 488 CG33465-PC 7..267 7..257 318 33.5 Plus
CG30087-PA 277 CG30087-PA 49..270 37..251 297 32.3 Plus
CG30091-PA 526 CG30091-PA 6..284 7..262 284 30 Plus