Clone BO34355 Report

Search the DGRC for BO34355

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptTaf12L-RA
Protein status:BO34355.pep: Imported from assembly
Sequenced Size:448

Clone Sequence Records

BO34355.complete Sequence

448 bp assembled on 2013-09-16

GenBank Submission: KX796019

> BO34355.complete
GAAGTTATCAGTCGACATGGATAGTAACATGGAACCTTGGTCCTTTGCCC
TCAATTTCGATGACAGCGATAAATCGTCGGATAACGAGAGCCACTCTTCG
ACCAGATCCTCGAGCCGCTCCAGTGACACCAGCATAGACACCAGCTCCGT
GGAGAAGGAGCCAGCTAGCGTAATTGAGAGCCAGTCTGTCCCTGGCGGAA
GCTACGATATTATCTCCAAGACCAACATGCTGCAATTTGTGCAGAAAATC
GATGCAAATTCATCGCTGGACGATCAAGGTTGCGATATGATGGCCAGAAT
AGCCGATGCCTTTGTTAACGACATATCCATGCGCATAGTTAAGTTGGCCA
AGTATCGAAAGAGCGACGTTAGCGTGCTGGACCTGAAGTTCATCCTCAAG
CGGGAGTTCAACATGGAGTTCCCAATTGAAGCAAGCTTTCTAGACCAT

BO34355.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
Taf12L-RA 417 CG15632-PA 1..414 17..430 2070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:52:36
Subject Length Description Subject Range Query Range Score Percent Strand
Taf12L-RA 591 CG15632-RA 17..431 16..430 2075 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4700995..4701216 430..209 1110 100 Minus
2L 23513712 2L 4701277..4701469 208..16 965 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:52:33 has no hits.

BO34355.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:07 Download gff for BO34355.complete
Subject Subject Range Query Range Percent Splice Strand
Taf12L-RA 18..431 17..432 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:43 Download gff for BO34355.complete
Subject Subject Range Query Range Percent Splice Strand
Taf12L-RA 18..431 17..432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:43 Download gff for BO34355.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4700993..4701216 209..432 99 <- Minus
2L 4701277..4701468 17..208 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:07 Download gff for BO34355.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4700993..4701216 209..432 99 <- Minus
arm_2L 4701277..4701468 17..208 100   Minus

BO34355.pep Sequence

Translation from 16 to 448

> BO34355.pep
MDSNMEPWSFALNFDDSDKSSDNESHSSTRSSSRSSDTSIDTSSVEKEPA
SVIESQSVPGGSYDIISKTNMLQFVQKIDANSSLDDQGCDMMARIADAFV
NDISMRIVKLAKYRKSDVSVLDLKFILKREFNMEFPIEASFLDH

BO34355.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
Taf12L-PA 138 CG15632-PA 1..138 1..138 690 100 Plus