BO34360.complete Sequence
892 bp assembled on 2013-09-16
GenBank Submission: KX798401
> BO34360.complete
GAAGTTATCAGTCGACATGTCTATCAAATCCTTGACATACGTTGCGATCT
TTGGCCTTTTTTGGGGCTCAATTGCGGGAACTGTAGTTGATCAGTTTGGG
ATATATGGTGGTTCACCGATTACCACCACGGAAAGGAGTAATGCGGAGTT
GCGCTGCATGAACATCAATCCGCAGAACTCGGTGGACTTGGAGCAGATGA
TGGGACTCTGGTACGGCAGCGAGATTATCGTGCACAGCCAAGATTTTCCG
GGCACCTACGAGTACGACTCATGTGTCATCATTCATCTGACCGATGCCAC
GGATCAGATCCGTTTGAGCCAAGCAAATCGCGGCTATGGCTATGGAAATC
AGGACTACAACCGTAACCAGAATAACTATGGACGCACCACCACCACTCAA
TCCTCCTATCCGGATAGCGATGAGTACCCGTTGAGATCGATTCAAAGCCA
GCAGAAGTACCTACGTTTGATTTGGAGTGAGCGTGATAACAATCTGGAGT
ATACTTTCAACTATACCACCAGTGCACCTGGTCAGTGGTCCAACATCGGC
GATCAGCGGGGATCCTTGGTCACCCTGAACACGTACACCCAGTTCACGGG
CACTGTCCAGGTGGTGAAAGCGGTCAACGATCACCTGGTGCTGACCTTCT
GCGGCAACGATGTTAAGAGCTCCATATACACAGTGGTTCTCACCCGCAAT
CGCCTTGGTCTCAGTTTAGATGAGCTGCGTAGCATCAGGAATCTGCTTTC
CCGCCGTGGACTCTACACGGAGACCATTCGCAAGGTTTGCAATGGATGTG
GGCGATTGGGTGGCAGCCTCTTCGCTCTTTTAGCCCTTTTGCTGGTCGTA
CGTTTGGCCTGGGGGCGTGGCCAGGCAAGCTTTCTAGACCAT
BO34360.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:52:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32032-RA | 861 | CG32032-PA | 1..858 | 17..874 | 4290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:52:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32032-RA | 1072 | CG32032-RA | 76..937 | 13..874 | 4295 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:52:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9093790..9094207 | 305..722 | 2090 | 100 | Plus |
| 3L | 28110227 | 3L | 9093128..9093311 | 13..196 | 905 | 99.5 | Plus |
| 3L | 28110227 | 3L | 9094569..9094721 | 722..874 | 765 | 100 | Plus |
| 3L | 28110227 | 3L | 9093618..9093737 | 195..314 | 570 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:52:11 has no hits.
BO34360.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:57 Download gff for
BO34360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32032-RA | 80..937 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:34 Download gff for
BO34360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32032-RA | 80..937 | 17..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:34 Download gff for
BO34360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9093132..9093311 | 17..196 | 100 | -> | Plus |
| 3L | 9093620..9093730 | 197..307 | 100 | -> | Plus |
| 3L | 9093793..9094206 | 308..721 | 100 | -> | Plus |
| 3L | 9094569..9094721 | 722..876 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:57 Download gff for
BO34360.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9086720..9086830 | 197..307 | 100 | -> | Plus |
| arm_3L | 9086232..9086411 | 17..196 | 100 | -> | Plus |
| arm_3L | 9086893..9087306 | 308..721 | 100 | -> | Plus |
| arm_3L | 9087669..9087821 | 722..876 | 98 | | Plus |
BO34360.pep Sequence
Translation from 16 to 892
> BO34360.pep
MSIKSLTYVAIFGLFWGSIAGTVVDQFGIYGGSPITTTERSNAELRCMNI
NPQNSVDLEQMMGLWYGSEIIVHSQDFPGTYEYDSCVIIHLTDATDQIRL
SQANRGYGYGNQDYNRNQNNYGRTTTTQSSYPDSDEYPLRSIQSQQKYLR
LIWSERDNNLEYTFNYTTSAPGQWSNIGDQRGSLVTLNTYTQFTGTVQVV
KAVNDHLVLTFCGNDVKSSIYTVVLTRNRLGLSLDELRSIRNLLSRRGLY
TETIRKVCNGCGRLGGSLFALLALLLVVRLAWGRGQASFLDH
BO34360.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32032-PA | 286 | CG32032-PA | 1..286 | 1..286 | 1502 | 100 | Plus |
