Clone BO34367 Report

Search the DGRC for BO34367

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG43076-RA
Protein status:BO34367.pep: Imported from assembly
Sequenced Size:514

Clone Sequence Records

BO34367.complete Sequence

514 bp assembled on 2013-09-16

GenBank Submission: KX799900

> BO34367.complete
GAAGTTATCAGTCGACATGAGTTCTATCGAGTGGATCGCTGATATGCTTT
TCTACGCTATGCGCACCTACCTCAAGATGACCGCACCCAGTTGCGATGCA
CACTTCCTTATCAATGCCCTTGGAAAGATTGAACATCTTATACATTTCAT
TGAATTTTCCATTATGATAATACGGCGGCCAAGAAATCTCATGGTTTTGA
CTAATAGCCGAGAGAGCCGCCTTCAACTCCGCAATTGCCTTTCAATGTTA
AGGACTTGGGCACAAGTGATATACGCATTGCTATCCGTGCTTGCTTTAAT
CCATATCAAAACGATTTACATTAGTATCGCGCTGTTGATTTCCGGCATCG
TCTTGTTCACTGATATGATCTTCATGGCAATAAATGGCGTACATGGCAGG
AGAACGCTGCGACCCGCGCAGATTCTATGGATTTCGTTGTGTTGTTGCAC
TTGGGTGCCATGGATCCTGGACGAAATGATCAACTATTTGTATAAAGCAA
GCTTTCTAGACCAT

BO34367.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:53:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG43076-RA 483 CG43076-PA 1..480 17..496 2400 100 Plus
CG42766-RA 297 CG42766-PA 11..288 27..304 370 75.5 Plus
CG42766-RB 297 CG42766-PB 11..273 27..289 325 74.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:53:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG43076-RA 771 CG43076-RA 100..579 17..496 2400 100 Plus
CG42766-RA 626 CG42766-RA 126..403 27..304 370 75.5 Plus
CG42766-RB 732 CG42766-RB 126..388 27..289 325 74.9 Plus
CG42766-RA 626 CG42766-RA 431..521 406..496 185 80.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:53:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15222849..15223056 496..289 1040 100 Minus
X 23542271 X 15223149..15223312 289..126 820 100 Minus
X 23542271 X 15223373..15223483 127..17 555 100 Minus
X 23542271 X 15977465..15977555 406..496 185 80.2 Plus
X 23542271 X 15977179..15977316 152..289 180 75.4 Plus
Blast to na_te.dros performed on 2014-11-28 13:53:25 has no hits.

BO34367.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:21 Download gff for BO34367.complete
Subject Subject Range Query Range Percent Splice Strand
CG43076-RA 16..495 17..498 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:57 Download gff for BO34367.complete
Subject Subject Range Query Range Percent Splice Strand
CG43076-RA 100..579 17..498 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:57 Download gff for BO34367.complete
Subject Subject Range Query Range Percent Splice Strand
X 15223149..15223310 128..289 100 <- Minus
X 15223373..15223483 17..127 100   Minus
X 15222846..15223055 290..498 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:21 Download gff for BO34367.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15116879..15117088 290..498 99 <- Minus
arm_X 15117182..15117343 128..289 100 <- Minus
arm_X 15117406..15117516 17..127 100   Minus

BO34367.pep Sequence

Translation from 16 to 514

> BO34367.pep
MSSIEWIADMLFYAMRTYLKMTAPSCDAHFLINALGKIEHLIHFIEFSIM
IIRRPRNLMVLTNSRESRLQLRNCLSMLRTWAQVIYALLSVLALIHIKTI
YISIALLISGIVLFTDMIFMAINGVHGRRTLRPAQILWISLCCCTWVPWI
LDEMINYLYKASFLDH

BO34367.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG43076-PA 160 CG43076-PA 1..160 1..160 831 100 Plus
CG42766-PA 98 CG42766-PA 1..98 1..98 248 51 Plus
CG42766-PB 98 CG42766-PB 1..92 1..92 223 50 Plus
CG43075-PA 174 CG43075-PA 1..174 1..157 153 26.7 Plus