BO34369.complete Sequence
442 bp assembled on 2013-10-14
> BO34369.complete
GAAGTTATCAGTCGACATGTGCTCTATGTCAGACTACGGAGCACGCCCCA
AAAAACCCATGAGCGCCTTCATGTTGTGGATGAATTCCACCGGGCGCAAG
AACATAAGAGCGGAGCATCCCGATTTTAGTGTCCAAGAAGTGTCTGTGAA
GGGCGGTGAGATGTGGCGAGCCATGGCCGATGAGCACAAGATCGTGTGGC
AGGAGTCGGCCAGCAAGGCAATGGCCGAGTACAAGGAGAAGTTGGAGAAG
TGGAATGCCTTCAAGGAGCACCAGACGGAGTCGTTTCCCCATATCTATGA
AGCTCCGTTGTCCTCTCGATTCTCAAAAACTAACCAAAGGCCAACCCTTT
TTGTGTACGACAGCAAGGATGAAGCAATGGCTCCGATCTGCAGGACGTGC
TTCTCAAAGGCCAAGTGCTTTCACGCAAGCTTTCTAGACCAT
BO34369.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7046-RB | 405 | CG7046-PB | 4..402 | 26..424 | 1995 | 100 | Plus |
| CG7046-RA | 402 | CG7046-PA | 1..399 | 26..424 | 1995 | 100 | Plus |
| CG7045-RA | 381 | CG7045-PA | 1..247 | 26..272 | 1010 | 93.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:07:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7046-RB | 550 | CG7046-RB | 67..465 | 26..424 | 1995 | 100 | Plus |
| CG7046-RA | 588 | CG7046-RA | 105..503 | 26..424 | 1995 | 100 | Plus |
| CG7045-RA | 553 | CG7045-RA | 99..345 | 26..272 | 1010 | 93.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:07:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22493263..22493661 | 26..424 | 1995 | 100 | Plus |
| 3R | 32079331 | 3R | 22491927..22492173 | 26..272 | 1010 | 93.9 | Plus |
| 3R | 32079331 | 3R | 22492202..22492304 | 322..424 | 290 | 85.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:07:12 has no hits.
BO34369.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 11:40:29 Download gff for
BO34369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7046-RA | 105..503 | 26..426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:39 Download gff for
BO34369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7046-RA | 105..503 | 26..426 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:39 Download gff for
BO34369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22493263..22493661 | 26..426 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 11:40:29 Download gff for
BO34369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18318985..18319383 | 26..426 | 99 | | Plus |
BO34369.pep Sequence
Translation from 16 to 442
> BO34369.pep
MCSMSDYGARPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMW
RAMADEHKIVWQESASKAMAEYKEKLEKWNAFKEHQTESFPHIYEAPLSS
RFSKTNQRPTLFVYDSKDEAMAPICRTCFSKAKCFHASFLDH
BO34369.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7046-PA | 133 | CG7046-PA | 1..133 | 4..136 | 720 | 100 | Plus |
| CG7046-PB | 134 | CG7046-PB | 2..134 | 4..136 | 720 | 100 | Plus |
| CG7045-PA | 126 | CG7045-PA | 1..126 | 4..136 | 491 | 71.4 | Plus |
| HmgD-PD | 112 | CG17950-PD | 1..72 | 4..81 | 169 | 44.9 | Plus |
| HmgD-PC | 112 | CG17950-PC | 1..72 | 4..81 | 169 | 44.9 | Plus |
