Clone BO34370 Report

Search the DGRC for BO34370

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG12661-RA
Protein status:BO34370.pep: Imported from assembly
Sequenced Size:427

Clone Sequence Records

BO34370.complete Sequence

427 bp assembled on 2013-09-16

GenBank Submission: KX794355

> BO34370.complete
GAAGTTATCAGTCGACATGGATTGTGACAATTCGAGTTTGGAGGAGAAGC
GAGAACGCGTTGACAATGCAATCCTAACCGCCATGGAGGATCTGGATCGG
GATTATCTGCGCAAATTGCAGATCGAGATGCACAGATGTGCGACCGCCTG
TTGTGCGGATGCGGACGCGAATGCGGAGGCGGTGGAGCGGTGCATCGATC
GCTGCCAAATCCGTTTGACCCGATCACGCTGCTTCGTACAGCAGGGTATA
TCCGATTTTGAGAATCGCCTAGAGAAGTGCATCCAGCAGTGCCGCCTCAA
TGGATCCGATTATAGCTTGGAACGTTGCACCAGCAACTGCGTGGATAGCC
ATGTGGGATTGTTGCCCGAAATGTTTAGGGCTATGCGAGATACCCTGGAG
AAAGGTGTTGCAAGCTTTCTAGACCAT

BO34370.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:52:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG12661-RB 396 CG12661-PB 1..393 17..409 1965 100 Plus
CG12661-RA 396 CG12661-PA 1..393 17..409 1965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:52:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG12661-RB 800 CG12661-RB 65..462 12..409 1975 99.7 Plus
CG12661-RA 517 CG12661-RA 65..462 12..409 1975 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:52:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8923226..8923623 409..12 1975 99.7 Minus
Blast to na_te.dros performed on 2014-11-28 13:52:51 has no hits.

BO34370.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:12 Download gff for BO34370.complete
Subject Subject Range Query Range Percent Splice Strand
CG12661-RA 70..462 17..411 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:48 Download gff for BO34370.complete
Subject Subject Range Query Range Percent Splice Strand
CG12661-RA 70..462 17..411 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:48 Download gff for BO34370.complete
Subject Subject Range Query Range Percent Splice Strand
X 8923222..8923618 17..411 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:12 Download gff for BO34370.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8817255..8817651 17..411 99   Minus

BO34370.pep Sequence

Translation from 16 to 427

> BO34370.pep
MDCDNSSLEEKRERVDNAILTAMEDLDRDYLRKLQIEMHRCATACCADAD
ANAEAVERCIDRCQIRLTRSRCFVQQGISDFENRLEKCIQQCRLNGSDYS
LERCTSNCVDSHVGLLPEMFRAMRDTLEKGVASFLDH

BO34370.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG12661-PB 131 CG12661-PB 1..131 1..131 695 100 Plus
CG12661-PA 131 CG12661-PA 1..131 1..131 695 100 Plus
CG5323-PA 146 CG5323-PA 2..142 8..133 288 34.8 Plus
CG5327-PA 149 CG5327-PA 2..139 8..130 260 32.6 Plus