BO34370.complete Sequence
427 bp assembled on 2013-09-16
GenBank Submission: KX794355
> BO34370.complete
GAAGTTATCAGTCGACATGGATTGTGACAATTCGAGTTTGGAGGAGAAGC
GAGAACGCGTTGACAATGCAATCCTAACCGCCATGGAGGATCTGGATCGG
GATTATCTGCGCAAATTGCAGATCGAGATGCACAGATGTGCGACCGCCTG
TTGTGCGGATGCGGACGCGAATGCGGAGGCGGTGGAGCGGTGCATCGATC
GCTGCCAAATCCGTTTGACCCGATCACGCTGCTTCGTACAGCAGGGTATA
TCCGATTTTGAGAATCGCCTAGAGAAGTGCATCCAGCAGTGCCGCCTCAA
TGGATCCGATTATAGCTTGGAACGTTGCACCAGCAACTGCGTGGATAGCC
ATGTGGGATTGTTGCCCGAAATGTTTAGGGCTATGCGAGATACCCTGGAG
AAAGGTGTTGCAAGCTTTCTAGACCAT
BO34370.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:52:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12661-RB | 396 | CG12661-PB | 1..393 | 17..409 | 1965 | 100 | Plus |
CG12661-RA | 396 | CG12661-PA | 1..393 | 17..409 | 1965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:52:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12661-RB | 800 | CG12661-RB | 65..462 | 12..409 | 1975 | 99.7 | Plus |
CG12661-RA | 517 | CG12661-RA | 65..462 | 12..409 | 1975 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:52:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8923226..8923623 | 409..12 | 1975 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:52:51 has no hits.
BO34370.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:12 Download gff for
BO34370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12661-RA | 70..462 | 17..411 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:48 Download gff for
BO34370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12661-RA | 70..462 | 17..411 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:48 Download gff for
BO34370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8923222..8923618 | 17..411 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:12 Download gff for
BO34370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8817255..8817651 | 17..411 | 99 | | Minus |
BO34370.pep Sequence
Translation from 16 to 427
> BO34370.pep
MDCDNSSLEEKRERVDNAILTAMEDLDRDYLRKLQIEMHRCATACCADAD
ANAEAVERCIDRCQIRLTRSRCFVQQGISDFENRLEKCIQQCRLNGSDYS
LERCTSNCVDSHVGLLPEMFRAMRDTLEKGVASFLDH
BO34370.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12661-PB | 131 | CG12661-PB | 1..131 | 1..131 | 695 | 100 | Plus |
CG12661-PA | 131 | CG12661-PA | 1..131 | 1..131 | 695 | 100 | Plus |
CG5323-PA | 146 | CG5323-PA | 2..142 | 8..133 | 288 | 34.8 | Plus |
CG5327-PA | 149 | CG5327-PA | 2..139 | 8..130 | 260 | 32.6 | Plus |