BO34373.complete Sequence
400 bp assembled on 2013-09-16
GenBank Submission: KX796840
> BO34373.complete
GAAGTTATCAGTCGACATGAGCAGCACATGGATGGGCAGAGCTCCAGAAC
CGGCCGACACGGAAATGGTGACCGTAACCACGCAGCCAAACTATGGGGTG
GTGGTGACCCAGATACCCGTCTACACCCTGAACGGAGTGGGGCCGGGCGC
ACATCCACTGGCTGTGGGCTGCAAGCCGATGAGGGTGAGGTGTCCGTCCT
GCAGGGGCGAGGTCACCACCAGTCTGGCCACGTCCCCCACCCGCAAGACC
CACATGTGCGCTCTGACCTTGTATATCTGCTGCTGCTGGCCCTTCATCTG
CCTTCCCTACTTCATCAACTACTGCAAGAGTGTCCAGCACTACTGTCCCA
ACTGTGGATGCCACATTGGGAGCTATAGCATTGCAAGCTTTCTAGACCAT
BO34373.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13511-RB | 369 | CG13511-PB | 1..366 | 17..382 | 1830 | 100 | Plus |
| CG13511-RA | 369 | CG13511-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:53:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42565-RB | 2577 | CG42565-RB | 1163..1530 | 15..382 | 1840 | 100 | Plus |
| CG13511-RB | 2577 | CG13511-RB | 1163..1530 | 15..382 | 1840 | 100 | Plus |
| CG13511-RA | 496 | CG13511-RA | 20..387 | 15..382 | 1840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22659710..22659977 | 15..282 | 1340 | 100 | Plus |
| 2R | 25286936 | 2R | 22660035..22660135 | 282..382 | 505 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 13:53:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 642..689 | 277..324 | 114 | 70.8 | Plus |
| Fw3 | 3132 | Fw3 FW3 3132bp | 578..615 | 60..98 | 107 | 76.9 | Plus |
BO34373.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:26 Download gff for
BO34373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13511-RA | 21..386 | 17..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:04 Download gff for
BO34373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13511-RA | 22..387 | 17..384 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:04 Download gff for
BO34373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22659712..22659977 | 17..282 | 100 | -> | Plus |
| 2R | 22660036..22660135 | 283..384 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:26 Download gff for
BO34373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18547217..18547482 | 17..282 | 100 | -> | Plus |
| arm_2R | 18547541..18547640 | 283..384 | 98 | | Plus |
BO34373.pep Sequence
Translation from 16 to 400
> BO34373.pep
MSSTWMGRAPEPADTEMVTVTTQPNYGVVVTQIPVYTLNGVGPGAHPLAV
GCKPMRVRCPSCRGEVTTSLATSPTRKTHMCALTLYICCCWPFICLPYFI
NYCKSVQHYCPNCGCHIGSYSIASFLDH
BO34373.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13511-PB | 122 | CG13511-PB | 1..122 | 1..122 | 699 | 100 | Plus |
| CG13511-PA | 122 | CG13511-PA | 1..122 | 1..122 | 699 | 100 | Plus |
| CG13510-PC | 129 | CG13510-PC | 57..127 | 50..120 | 226 | 47.9 | Plus |
| CG13510-PB | 129 | CG13510-PB | 57..127 | 50..120 | 226 | 47.9 | Plus |
| CG13510-PA | 129 | CG13510-PA | 57..127 | 50..120 | 226 | 47.9 | Plus |
