Clone BO34374 Report

Search the DGRC for BO34374

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG13965-RA
Protein status:BO34374.pep: Imported from assembly
Sequenced Size:433

Clone Sequence Records

BO34374.complete Sequence

433 bp assembled on 2013-09-16

GenBank Submission: KX797522

> BO34374.complete
GAAGTTATCAGTCGACATGGCGAAACTTGAACTGAAGCTGATTGGAATCG
CTATATTCTTGGTAGCCGCGCTCGAGGCTCAGGAAACCCCTGCGGCTGAA
TCATCTCCAGCGTCCCCAACAGATGGCGAAACGTCTCCAGTTACAGAAGC
CAGTTCCATCGGAGAATTAACTCAGACCACAGAAGCGGGGTCGGAGGTCA
CAGAATCACCAACAAATAGCACCGATATGGTTAATAGCACGGACAACCCA
GACCCGAACGGCTCGCCTGACCCTGAAAATGGAGGAGATCCATTTGTGAA
GCCAGGAAGCCATATAAAGGGACCTCGACACGTTAGAGCACATGATGGCT
TCCACAGCCTGAAGACGGAGAAGCATTGGGCAAGCTGGAACGATGCCTTT
ACCACGCCACGTCCCGCAAGCTTTCTAGACCAT

BO34374.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:53:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG13965-RA 402 CG13965-PA 1..399 17..415 1995 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:53:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG13965-RA 535 CG13965-RA 54..453 16..415 2000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:53:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19961840..19962215 415..40 1880 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:53:49 has no hits.

BO34374.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:27 Download gff for BO34374.complete
Subject Subject Range Query Range Percent Splice Strand
CG13965-RA 55..453 17..417 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:05 Download gff for BO34374.complete
Subject Subject Range Query Range Percent Splice Strand
CG13965-RA 55..453 17..417 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:05 Download gff for BO34374.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19961836..19962214 41..417 99 <- Minus
2L 19962275..19962298 17..40 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:27 Download gff for BO34374.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19961836..19962214 41..417 99 <- Minus
arm_2L 19962275..19962298 17..40 100   Minus

BO34374.pep Sequence

Translation from 16 to 433

> BO34374.pep
MAKLELKLIGIAIFLVAALEAQETPAAESSPASPTDGETSPVTEASSIGE
LTQTTEAGSEVTESPTNSTDMVNSTDNPDPNGSPDPENGGDPFVKPGSHI
KGPRHVRAHDGFHSLKTEKHWASWNDAFTTPRPASFLDH

BO34374.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG13965-PA 133 CG13965-PA 1..133 1..133 703 100 Plus