Clone BO34376 Report

Search the DGRC for BO34376

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:76
Vector:pDNR-Dual
Associated Gene/TranscriptGrx-1-RA
Protein status:BO34376.pep: Imported from assembly
Sequenced Size:382

Clone Sequence Records

BO34376.complete Sequence

382 bp assembled on 2013-09-16

GenBank Submission: KX797142

> BO34376.complete
GAAGTTATCAGTCGACATGGGTACGGTGGTCAGCACCCTGCAGCGACCCA
CTCTCTACGTGAGCATGGACAGCTCGCATGCGCAGTTCGTGCGGGACACA
ATCAGCGGCAACAAGGTGGTGATCTTTAGCAAGAGCTACTGCCCCTACTG
CAGCATGGCCAAGGAACAGTTCCGAAAGATCAACGTCAAGGCAACGGTGA
TTGAGCTGGACCAGCGGGATGATGGCAACGAGATCCAGGCGGTTCTTGGC
GAGATGACGGGCTCGAGGACCGTTCCACGTTGCTTCATCGATGGCAAGTT
CGTGGGTGGCGGCACCGACGTGAAGCGGCTATACGAACAGGGCATACTGC
AGAAGTATTTTCAGGCAAGCTTTCTAGACCAT

BO34376.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
Grx-1-RA 351 CG7975-PA 1..348 17..364 1740 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
Grx-1-RA 569 CG7975-RA 146..494 16..364 1745 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21757490..21757838 16..364 1745 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:53:59 has no hits.

BO34376.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:32 Download gff for BO34376.complete
Subject Subject Range Query Range Percent Splice Strand
Grx-1-RA 147..494 17..366 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:07 Download gff for BO34376.complete
Subject Subject Range Query Range Percent Splice Strand
Grx-1-RA 147..494 17..366 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:07 Download gff for BO34376.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21757491..21757838 17..366 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:32 Download gff for BO34376.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17644996..17645343 17..366 99   Plus

BO34376.pep Sequence

Translation from 16 to 382

> BO34376.pep
MGTVVSTLQRPTLYVSMDSSHAQFVRDTISGNKVVIFSKSYCPYCSMAKE
QFRKINVKATVIELDQRDDGNEIQAVLGEMTGSRTVPRCFIDGKFVGGGT
DVKRLYEQGILQKYFQASFLDH

BO34376.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:01
Subject Length Description Subject Range Query Range Score Percent Strand
Grx-1-PA 116 CG7975-PA 1..116 1..116 599 100 Plus
CG6852-PC 114 CG6852-PC 1..114 1..116 415 68.1 Plus
CG6852-PA 114 CG6852-PA 1..114 1..116 415 68.1 Plus