BO34382.complete Sequence
670 bp assembled on 2013-10-14
> BO34382.complete
GAAGTTATCAGTCGACATGTGGAACAAACCGTATATGGGAATAATAATTT
TGTGTATGCTAGCCAGCGGTGGAAGAGCCGTACCCACCGATTTGGCCAGA
TACTCTCAGTTGGGACAAGTACCGTTGACGGCAGCCAACAACAGCGTGGT
GTCCACCACTGATCATTTGGGTCTCCTGCAGGAGACGTCCTCGGTAGCTC
CTGACTTCGAATACTCACTACTGGGCGAGGATCCGCAGGATCAGCAATGG
TTTCGCGTCAGTCTTACTCCGAAAACCAACAAAACTGGCTACCGCGCACA
GTTTGCCACTCGAAAACATCCGCCCTTTAATTCGCAAGTGGCCCACCGGC
ATGATAAAACTATTCAGGATCTGCTTAACTGGCTGGACCGTTCCGAGGAT
CAGAGTTTGTGGAAAGTTTATCGTGATCTCTTGGAGTACACACCACAGGC
ACAGTCATCCAGCCAGGAGTATCCTAATGGCAACGTAATCGAAAAAGCGA
AGAAGTCGTCCCAGAAGCAGAAATGTCATAGGCGCAATCACCGACTGCTC
CTGGTGGATGAAGATGGAACCAGTACCACGACATCATTACCACCAAGTAA
GGACCAAACGCAACCGACACATGAGTTGGTTTATTTCATAAGGGAGCCTA
AGGCAAGCTTTCTAGACCAT
BO34382.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:06:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16956-RA | 600 | CG16956-PA | 1..597 | 56..652 | 2985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:06:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16956-RA | 737 | CG16956-RA | 21..656 | 17..652 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:06:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13413864..13414402 | 652..114 | 2695 | 100 | Minus |
2L | 23513712 | 2L | 13414458..13414555 | 114..17 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:06:56 has no hits.
BO34382.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 10:43:33 Download gff for
BO34382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16956-RA | 21..656 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:34 Download gff for
BO34382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16956-RA | 21..656 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:34 Download gff for
BO34382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13414458..13414555 | 17..114 | 100 | | Minus |
2L | 13413862..13414401 | 115..654 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 10:43:33 Download gff for
BO34382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13413862..13414401 | 115..654 | 99 | <- | Minus |
arm_2L | 13414458..13414555 | 17..114 | 100 | | Minus |
BO34382.pep Sequence
Translation from 16 to 670
> BO34382.pep
MWNKPYMGIIILCMLASGGRAVPTDLARYSQLGQVPLTAANNSVVSTTDH
LGLLQETSSVAPDFEYSLLGEDPQDQQWFRVSLTPKTNKTGYRAQFATRK
HPPFNSQVAHRHDKTIQDLLNWLDRSEDQSLWKVYRDLLEYTPQAQSSSQ
EYPNGNVIEKAKKSSQKQKCHRRNHRLLLVDEDGTSTTTSLPPSKDQTQP
THELVYFIREPKASFLDH
BO34382.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16956-PA | 199 | CG16956-PA | 1..199 | 14..212 | 1047 | 100 | Plus |