Clone BO34382 Report

Search the DGRC for BO34382

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:82
Vector:pDNR-Dual
Protein status:BO34382.pep: Imported from assembly
Sequenced Size:670

Clone Sequence Records

BO34382.complete Sequence

670 bp assembled on 2013-10-14

> BO34382.complete
GAAGTTATCAGTCGACATGTGGAACAAACCGTATATGGGAATAATAATTT
TGTGTATGCTAGCCAGCGGTGGAAGAGCCGTACCCACCGATTTGGCCAGA
TACTCTCAGTTGGGACAAGTACCGTTGACGGCAGCCAACAACAGCGTGGT
GTCCACCACTGATCATTTGGGTCTCCTGCAGGAGACGTCCTCGGTAGCTC
CTGACTTCGAATACTCACTACTGGGCGAGGATCCGCAGGATCAGCAATGG
TTTCGCGTCAGTCTTACTCCGAAAACCAACAAAACTGGCTACCGCGCACA
GTTTGCCACTCGAAAACATCCGCCCTTTAATTCGCAAGTGGCCCACCGGC
ATGATAAAACTATTCAGGATCTGCTTAACTGGCTGGACCGTTCCGAGGAT
CAGAGTTTGTGGAAAGTTTATCGTGATCTCTTGGAGTACACACCACAGGC
ACAGTCATCCAGCCAGGAGTATCCTAATGGCAACGTAATCGAAAAAGCGA
AGAAGTCGTCCCAGAAGCAGAAATGTCATAGGCGCAATCACCGACTGCTC
CTGGTGGATGAAGATGGAACCAGTACCACGACATCATTACCACCAAGTAA
GGACCAAACGCAACCGACACATGAGTTGGTTTATTTCATAAGGGAGCCTA
AGGCAAGCTTTCTAGACCAT

BO34382.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:06:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG16956-RA 600 CG16956-PA 1..597 56..652 2985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:06:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG16956-RA 737 CG16956-RA 21..656 17..652 3180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:06:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13413864..13414402 652..114 2695 100 Minus
2L 23513712 2L 13414458..13414555 114..17 490 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:06:56 has no hits.

BO34382.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 10:43:33 Download gff for BO34382.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 21..656 17..654 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:34 Download gff for BO34382.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 21..656 17..654 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:34 Download gff for BO34382.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13414458..13414555 17..114 100   Minus
2L 13413862..13414401 115..654 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 10:43:33 Download gff for BO34382.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13413862..13414401 115..654 99 <- Minus
arm_2L 13414458..13414555 17..114 100   Minus

BO34382.pep Sequence

Translation from 16 to 670

> BO34382.pep
MWNKPYMGIIILCMLASGGRAVPTDLARYSQLGQVPLTAANNSVVSTTDH
LGLLQETSSVAPDFEYSLLGEDPQDQQWFRVSLTPKTNKTGYRAQFATRK
HPPFNSQVAHRHDKTIQDLLNWLDRSEDQSLWKVYRDLLEYTPQAQSSSQ
EYPNGNVIEKAKKSSQKQKCHRRNHRLLLVDEDGTSTTTSLPPSKDQTQP
THELVYFIREPKASFLDH

BO34382.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG16956-PA 199 CG16956-PA 1..199 14..212 1047 100 Plus