BO34383.complete Sequence
232 bp assembled on 2013-09-16
GenBank Submission: KX799843
> BO34383.complete
GAAGTTATCAGTCGACATGTTGATAGCCCGACTGGCGTTTTTAGTCTCTA
TTCTGGGCATTGTGGTTGGGTTCCAGAAACTGGACTCCACTTCCAGTCCC
ACGACTACCAGCACTATGAGGTCTGCCCCTTATTGTCAGCCAAGTGGAGG
ATATTGTCGGATGCATATGGATTGCTGTTCGCGAATGTGCATTCAAGTGT
CAGCAGAGTGTCGCGCAAGCTTTCTAGACCAT
BO34383.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42869-RB | 201 | CG42869-PB | 1..198 | 17..214 | 990 | 100 | Plus |
| CG43618-RA | 171 | CG43618-PA | 34..168 | 80..214 | 570 | 94.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:53:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42869-RB | 283 | CG42869-RB | 26..223 | 17..214 | 990 | 100 | Plus |
| CG43618-RA | 225 | CG43618-RA | 43..177 | 80..214 | 570 | 94.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:53:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21736687..21736824 | 154..17 | 690 | 100 | Minus |
| 3R | 32079331 | 3R | 8049209..8049283 | 80..154 | 315 | 94.7 | Plus |
| 3R | 32079331 | 3R | 21736573..21736636 | 214..151 | 305 | 98.4 | Minus |
| 3R | 32079331 | 3R | 8049345..8049408 | 151..214 | 260 | 93.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:53:31 has no hits.
BO34383.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:23 Download gff for
BO34383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42869-RB | 31..223 | 22..216 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:00 Download gff for
BO34383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42869-RB | 31..223 | 22..216 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:00 Download gff for
BO34383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21736571..21736632 | 155..216 | 96 | <- | Minus |
| 3R | 21736687..21736819 | 22..154 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:23 Download gff for
BO34383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17562293..17562354 | 155..216 | 96 | <- | Minus |
| arm_3R | 17562409..17562541 | 22..154 | 100 | | Minus |
BO34383.pep Sequence
Translation from 16 to 232
> BO34383.pep
MLIARLAFLVSILGIVVGFQKLDSTSSPTTTSTMRSAPYCQPSGGYCRMH
MDCCSRMCIQVSAECRASFLDH
BO34383.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42869-PB | 66 | CG42869-PB | 1..66 | 1..66 | 349 | 100 | Plus |
| CG43618-PA | 56 | CG43618-PA | 2..56 | 9..66 | 253 | 81 | Plus |
