Clone BO34384 Report

Search the DGRC for BO34384

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptCG5767-RA
Protein status:BO34384.pep: Imported from assembly
Sequenced Size:793

Clone Sequence Records

BO34384.complete Sequence

793 bp assembled on 2013-09-16

GenBank Submission: KX798586

> BO34384.complete
GAAGTTATCAGTCGACATGAAGCTTCTGTGCAGTGTGCTAATCCTCGCCA
GCGTTCTGGCGGCCAACGCCAAGCCCAATGTTCAGCTGCAGCTGCAGAGT
GCCCTCGACCAGTATTTGGTGCATGCCCGCAATTTGGATACCACCGTTTC
CGCTGACGTGACCACCCAGTGCTTCAACCTCTATCTGCCCATGCTGAACG
AAGTGGCTGCCACCTTCTCCACTTCCTATCAGGCCTGCATCAGCACCGCC
AACGCGGAGACCGCCAATCTGACCGCCGAGGCCGACAAGCAGCAGAAGAT
CTACCAGGCGGAGGTCACCAGCCTATGCAGCGCCTTCACCGCCTGCAACA
GCGACAACGATACCACCAACTTCTTCAAGTGCTACGCCAATGCGGCCGAG
AGTGATGTATCTGTGATCTATGGCATCGCCACCAATGCCGCCAGTTCGGC
CAACTCCCTGAGCACAGGCATCCAGGCCATCCAGGACACCGAGTACCAGT
GCACCAACACCACGGAGAGCAACTACGTCCGGGATACCGCTGCCACCTAC
GATCTGTTGGACAGCTGCCTGAAGTACGGAGTGCCCACCACCTCCACCGC
CGCCCCCTCCTCCACCAGCCCCGTTGATAGCTCGAGCGGGGCTCCTGTCA
CTGATGGCACCACTGTTGTGGCATCGTCCACCGCCGCTGCTGACACCACT
GTGGCTGTGACCACCGCTGCACCCGGAACCGCTGCTCCGGCGACCACCGC
CACTTCCGGCACTTCGGCCTCTTCTGCAAGCTTTCTAGACCAT

BO34384.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG5767-RA 762 CG5767-PA 1..759 17..775 3780 99.9 Plus
CG5770-RA 642 CG5770-PA 1..569 17..591 1265 81.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG5767-RA 854 CG5767-RA 41..801 15..775 3790 99.9 Plus
CG5770-RA 910 CG5770-RA 22..596 11..591 1280 81.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18046439..18046820 775..394 1910 100 Minus
2R 25286936 2R 18047000..18047327 395..68 1625 99.7 Minus
2R 25286936 2R 18044621..18044919 393..95 655 81.3 Minus
2R 25286936 2R 18044360..18044548 591..403 540 85.7 Minus
2R 25286936 2R 18047391..18047444 68..15 270 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:53:37 has no hits.

BO34384.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:25 Download gff for BO34384.complete
Subject Subject Range Query Range Percent Splice Strand
CG5767-RA 43..801 17..777 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:03 Download gff for BO34384.complete
Subject Subject Range Query Range Percent Splice Strand
CG5767-RA 43..801 17..777 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:03 Download gff for BO34384.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18046437..18046819 395..777 99 <- Minus
2R 18047001..18047327 68..394 99 <- Minus
2R 18047392..18047442 17..67 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:25 Download gff for BO34384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13933942..13934324 395..777 99 <- Minus
arm_2R 13934506..13934832 68..394 99 <- Minus
arm_2R 13934897..13934947 17..67 100   Minus

BO34384.pep Sequence

Translation from 16 to 793

> BO34384.pep
MKLLCSVLILASVLAANAKPNVQLQLQSALDQYLVHARNLDTTVSADVTT
QCFNLYLPMLNEVAATFSTSYQACISTANAETANLTAEADKQQKIYQAEV
TSLCSAFTACNSDNDTTNFFKCYANAAESDVSVIYGIATNAASSANSLST
GIQAIQDTEYQCTNTTESNYVRDTAATYDLLDSCLKYGVPTTSTAAPSST
SPVDSSSGAPVTDGTTVVASSTAAADTTVAVTTAAPGTAAPATTATSGTS
ASSASFLDH

BO34384.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG5767-PA 253 CG5767-PA 1..253 1..253 1259 100 Plus
CG5770-PA 213 CG5770-PA 1..206 1..204 800 75 Plus
CG10911-PA 359 CG10911-PA 5..258 4..255 292 26.8 Plus
Muc55B-PB 485 CG5765-PB 6..256 3..244 242 29.7 Plus
Muc55B-PA 485 CG5765-PA 6..256 3..244 242 29.7 Plus