BO34384.complete Sequence
793 bp assembled on 2013-09-16
GenBank Submission: KX798586
> BO34384.complete
GAAGTTATCAGTCGACATGAAGCTTCTGTGCAGTGTGCTAATCCTCGCCA
GCGTTCTGGCGGCCAACGCCAAGCCCAATGTTCAGCTGCAGCTGCAGAGT
GCCCTCGACCAGTATTTGGTGCATGCCCGCAATTTGGATACCACCGTTTC
CGCTGACGTGACCACCCAGTGCTTCAACCTCTATCTGCCCATGCTGAACG
AAGTGGCTGCCACCTTCTCCACTTCCTATCAGGCCTGCATCAGCACCGCC
AACGCGGAGACCGCCAATCTGACCGCCGAGGCCGACAAGCAGCAGAAGAT
CTACCAGGCGGAGGTCACCAGCCTATGCAGCGCCTTCACCGCCTGCAACA
GCGACAACGATACCACCAACTTCTTCAAGTGCTACGCCAATGCGGCCGAG
AGTGATGTATCTGTGATCTATGGCATCGCCACCAATGCCGCCAGTTCGGC
CAACTCCCTGAGCACAGGCATCCAGGCCATCCAGGACACCGAGTACCAGT
GCACCAACACCACGGAGAGCAACTACGTCCGGGATACCGCTGCCACCTAC
GATCTGTTGGACAGCTGCCTGAAGTACGGAGTGCCCACCACCTCCACCGC
CGCCCCCTCCTCCACCAGCCCCGTTGATAGCTCGAGCGGGGCTCCTGTCA
CTGATGGCACCACTGTTGTGGCATCGTCCACCGCCGCTGCTGACACCACT
GTGGCTGTGACCACCGCTGCACCCGGAACCGCTGCTCCGGCGACCACCGC
CACTTCCGGCACTTCGGCCTCTTCTGCAAGCTTTCTAGACCAT
BO34384.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:53:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5767-RA | 762 | CG5767-PA | 1..759 | 17..775 | 3780 | 99.9 | Plus |
CG5770-RA | 642 | CG5770-PA | 1..569 | 17..591 | 1265 | 81.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:53:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5767-RA | 854 | CG5767-RA | 41..801 | 15..775 | 3790 | 99.9 | Plus |
CG5770-RA | 910 | CG5770-RA | 22..596 | 11..591 | 1280 | 81.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:53:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18046439..18046820 | 775..394 | 1910 | 100 | Minus |
2R | 25286936 | 2R | 18047000..18047327 | 395..68 | 1625 | 99.7 | Minus |
2R | 25286936 | 2R | 18044621..18044919 | 393..95 | 655 | 81.3 | Minus |
2R | 25286936 | 2R | 18044360..18044548 | 591..403 | 540 | 85.7 | Minus |
2R | 25286936 | 2R | 18047391..18047444 | 68..15 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:53:37 has no hits.
BO34384.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:25 Download gff for
BO34384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5767-RA | 43..801 | 17..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:03 Download gff for
BO34384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5767-RA | 43..801 | 17..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:03 Download gff for
BO34384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18046437..18046819 | 395..777 | 99 | <- | Minus |
2R | 18047001..18047327 | 68..394 | 99 | <- | Minus |
2R | 18047392..18047442 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:25 Download gff for
BO34384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13933942..13934324 | 395..777 | 99 | <- | Minus |
arm_2R | 13934506..13934832 | 68..394 | 99 | <- | Minus |
arm_2R | 13934897..13934947 | 17..67 | 100 | | Minus |
BO34384.pep Sequence
Translation from 16 to 793
> BO34384.pep
MKLLCSVLILASVLAANAKPNVQLQLQSALDQYLVHARNLDTTVSADVTT
QCFNLYLPMLNEVAATFSTSYQACISTANAETANLTAEADKQQKIYQAEV
TSLCSAFTACNSDNDTTNFFKCYANAAESDVSVIYGIATNAASSANSLST
GIQAIQDTEYQCTNTTESNYVRDTAATYDLLDSCLKYGVPTTSTAAPSST
SPVDSSSGAPVTDGTTVVASSTAAADTTVAVTTAAPGTAAPATTATSGTS
ASSASFLDH
BO34384.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:42:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5767-PA | 253 | CG5767-PA | 1..253 | 1..253 | 1259 | 100 | Plus |
CG5770-PA | 213 | CG5770-PA | 1..206 | 1..204 | 800 | 75 | Plus |
CG10911-PA | 359 | CG10911-PA | 5..258 | 4..255 | 292 | 26.8 | Plus |
Muc55B-PB | 485 | CG5765-PB | 6..256 | 3..244 | 242 | 29.7 | Plus |
Muc55B-PA | 485 | CG5765-PA | 6..256 | 3..244 | 242 | 29.7 | Plus |