Clone BO34387 Report

Search the DGRC for BO34387

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:343
Well:87
Vector:pDNR-Dual
Associated Gene/TranscriptCG14316-RA
Protein status:BO34387.pep: Imported from assembly
Sequenced Size:1324

Clone Sequence Records

BO34387.complete Sequence

1324 bp assembled on 2013-09-16

GenBank Submission: KX799266

> BO34387.complete
GAAGTTATCAGTCGACATGACTTCGCCCAAAAAGAAAGATAAGAATTCGA
ACGAGTTGGTTTGTAGCAGTGATTCCGAGCGGGAAAATGATGATCTGGCT
ATGCTGAAAATTGTTCTAAGGAAGCTAAATGTCAACGATCAGACGCTGCT
CCATCGCCATGTTGGCCATATACCGGATGCCCTTCATATGCTCTGGAGAT
TGCAACATCCACGTCTGAACTTTGAGTTAATGCAACGGAAGCTGCATGGA
TCCGATTTGGAATTGTTTCTACAGGAAATGATTACGGATATTCCCAGCAT
TAAATTTCGCAGTGAGAGCTTGCAGGACGAATTGAACATCCTGGAACGGG
CCAATATTAAACGTCTGCTGCACGTGAAATGTTGTACGATTACGTGGAAA
AATTCGACGAGCCAGAAGAATACCAAATTCCCTCATTGGCCATTTCTCGC
ACTGCCCAAATTGATGAGCAATCTGACCGATCTCGATATATACTGCCCAG
TGCAGGATTGCTTTATCGATCAGTTTGCCAAATTGGAAGCCCTGAAGATC
GCTGAAGAGATTTCTAAACCAGCCATGGACGCCATTTACTTAAGTGGCGC
ACCATTAAAGTGTTTGAATCTATCGGGTTCTCATACATATCCCACAAGTT
GCATCTCACACTGCAAATATCTGAGCAACTTATTCGTAAATCTGGACACT
TTTTTGGCCGGTCAAAATGAGATTCTCAAGCTGCCCAGTCTTACTGAACT
GAAAATCACTGAGATTCGAGAAAACAAGGACACAACGAAAGCCCTAGCCA
ATGTAGTGCAGACAAAAGGCAATGAACTTGTGGGCATTCAAATTAATTGC
ATCTTTGAGGATCATATCAAGTGCCTAAGTGATTTGACTTTAAATTGCTG
TATAAATCTGACGGAACTGCAGTTATCCAATTGCATATTTGCCTATCAGG
ATATAGTCAAGTTGTGTCTGCCCGTTGGCATAACCTTTGCTCGATTCACC
AACTGTCCAGATCTCACTGATGAACAGCTCTTGGACTTCATCAAGGCTAA
TGCCGAAATGGAAGAGCTTCTACTGGATCAGTGCCCAGAACTGACGGAAG
ATCTACTTCATGGTGTTCTTAAAGTGCGCAGTAGTGGTAATAAACAAGTG
CACTTGTTGCTCAGAATTGCGAAAAGTCCGAATCTTTGGGATACATATCA
ACAGAACTTAAAGTATTGGAAACGAAAGGAATCTATTCTTAAATTGGAAA
GTTTGGAGAGTTCTGCCTCGGAGGACATTGTGATGCACTTTGAAAATGAA
AATTTAGCAAGCTTTCTAGACCAT

BO34387.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14316-RA 1293 CG14316-PA 1..1290 17..1306 6450 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:49:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG14316-RA 1468 CG14316-RA 96..1385 17..1306 6450 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:49:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18152215..18153409 17..1211 5960 99.9 Plus
3R 32079331 3R 18153459..18153557 1208..1306 495 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:49:13 has no hits.

BO34387.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:49:56 Download gff for BO34387.complete
Subject Subject Range Query Range Percent Splice Strand
CG14316-RA 96..1385 17..1308 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:41 Download gff for BO34387.complete
Subject Subject Range Query Range Percent Splice Strand
CG14316-RA 96..1385 17..1308 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:41 Download gff for BO34387.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18152215..18153405 17..1207 100 -> Plus
3R 18153459..18153557 1208..1308 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:49:56 Download gff for BO34387.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13977937..13979127 17..1207 100 -> Plus
arm_3R 13979181..13979279 1208..1308 98   Plus

BO34387.pep Sequence

Translation from 16 to 1324

> BO34387.pep
MTSPKKKDKNSNELVCSSDSERENDDLAMLKIVLRKLNVNDQTLLHRHVG
HIPDALHMLWRLQHPRLNFELMQRKLHGSDLELFLQEMITDIPSIKFRSE
SLQDELNILERANIKRLLHVKCCTITWKNSTSQKNTKFPHWPFLALPKLM
SNLTDLDIYCPVQDCFIDQFAKLEALKIAEEISKPAMDAIYLSGAPLKCL
NLSGSHTYPTSCISHCKYLSNLFVNLDTFLAGQNEILKLPSLTELKITEI
RENKDTTKALANVVQTKGNELVGIQINCIFEDHIKCLSDLTLNCCINLTE
LQLSNCIFAYQDIVKLCLPVGITFARFTNCPDLTDEQLLDFIKANAEMEE
LLLDQCPELTEDLLHGVLKVRSSGNKQVHLLLRIAKSPNLWDTYQQNLKY
WKRKESILKLESLESSASEDIVMHFENENLASFLDH

BO34387.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14316-PA 430 CG14316-PA 1..430 1..430 2249 100 Plus
CG31819-PA 497 CG31819-PA 54..477 1..411 420 28.1 Plus