Clone BO34402 Report

Search the DGRC for BO34402

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:344
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG15641-RA
Protein status:BO34402.pep: Imported from assembly
Sequenced Size:400

Clone Sequence Records

BO34402.complete Sequence

400 bp assembled on 2013-09-16

GenBank Submission: KX793838

> BO34402.complete
GAAGTTATCAGTCGACATGCGACGGCAAGGAGTGCATTGCTGCTGTCTGG
TGGCCATCGCCCTGGCCATGGCCATACGCCAGGTGTCCATGGGCATCAGC
GCCAGCGATCGCCGCTTCCAGTGCCTGCAGACGCGACTGATAGGCCAGGC
CAACTGCTCGCCATGCGCCGATCTGTACGTCTTCAATCGCCAATCCGCCT
ACCGGCGCTGCGAGCACGTCAACGGTAATTGCTACCCACATCGCACGGTC
TTCGCCAGCGCCCGCATGTGCGAGCTCACCTGCCAGCCGTACATCCGGCG
ACCCACGCTGCACGAGGTGACCACCCTGCCGCCGCCACCACCGATCGTCG
AGCCCTTCGGCGACAGCGATGAGGAGTTCGAGGCAAGCTTTCTAGACCAT

BO34402.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG15641-RA 369 CG15641-PA 1..366 17..382 1830 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:54:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15641-RA 413 CG15641-RA 16..381 17..382 1830 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15467906..15468271 17..382 1830 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:54:18 has no hits.

BO34402.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:37 Download gff for BO34402.complete
Subject Subject Range Query Range Percent Splice Strand
CG15641-RA 16..381 17..384 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:11 Download gff for BO34402.complete
Subject Subject Range Query Range Percent Splice Strand
CG15641-RA 16..381 17..384 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:11 Download gff for BO34402.complete
Subject Subject Range Query Range Percent Splice Strand
X 15467906..15468271 17..384 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:37 Download gff for BO34402.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15361939..15362304 17..384 99   Plus

BO34402.pep Sequence

Translation from 16 to 400

> BO34402.pep
MRRQGVHCCCLVAIALAMAIRQVSMGISASDRRFQCLQTRLIGQANCSPC
ADLYVFNRQSAYRRCEHVNGNCYPHRTVFASARMCELTCQPYIRRPTLHE
VTTLPPPPPIVEPFGDSDEEFEASFLDH

BO34402.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG15641-PA 122 CG15641-PA 1..122 1..122 669 100 Plus