BO34449.complete Sequence
370 bp assembled on 2013-09-16
GenBank Submission: KX799666
> BO34449.complete
GAAGTTATCAGTCGACATGTCCGTCCTGAAAGTATTCATCTTCGTCGCCC
TCTTCGCCGTGGCCTACTGCGCACCCAGTCCCGGCTTCTTTGGCAAACAC
GAGCACCACACCATCCACGTGCCCTACAAGGTGCACACGGTGCACCACCA
TCACGTTCAGAAGGTCCATGTGCCGGTGGTGAAGCACGTGCCGGTGCCCA
TTTACAAGGAGGTGCCCGTGCACCACGTCCACCACGAGGAGATCCCCGTG
CCGGTGCACCACGTCCATCACGAGGAGATCCCGGTGCACCATGTCTTCGA
TGACCACCACGACCACCACGGCTGGAGCTCCCACCACGGACACGGCTGGC
TGGCAAGCTTTCTAGACCAT
BO34449.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14752-RA | 339 | CG14752-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:49:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14752-RA | 540 | CG14752-RA | 73..409 | 16..352 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:49:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8591565..8591817 | 100..352 | 1265 | 100 | Plus |
| 2R | 25286936 | 2R | 8591023..8591084 | 38..99 | 310 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 13:49:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| invader2 | 5124 | invader2 INVADER2 5124bp | 719..753 | 71..37 | 121 | 82.9 | Minus |
BO34449.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:50:01 Download gff for
BO34449.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14752-RA | 74..409 | 17..354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:35:44 Download gff for
BO34449.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14752-RA | 74..409 | 17..354 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:35:44 Download gff for
BO34449.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8590570..8590590 | 17..37 | 100 | -> | Plus |
| 2R | 8591023..8591084 | 38..99 | 100 | -> | Plus |
| 2R | 8591565..8591817 | 100..354 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:50:01 Download gff for
BO34449.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4478075..4478095 | 17..37 | 100 | -> | Plus |
| arm_2R | 4478528..4478589 | 38..99 | 100 | -> | Plus |
| arm_2R | 4479070..4479322 | 100..354 | 99 | | Plus |
BO34449.pep Sequence
Translation from 16 to 370
> BO34449.pep
MSVLKVFIFVALFAVAYCAPSPGFFGKHEHHTIHVPYKVHTVHHHHVQKV
HVPVVKHVPVPIYKEVPVHHVHHEEIPVPVHHVHHEEIPVHHVFDDHHDH
HGWSSHHGHGWLASFLDH
BO34449.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:41:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14752-PA | 112 | CG14752-PA | 1..112 | 1..112 | 662 | 100 | Plus |
| CG14052-PB | 163 | CG14052-PB | 7..114 | 3..107 | 150 | 36.3 | Plus |
| CG13482-PA | 102 | CG13482-PA | 22..97 | 26..109 | 140 | 40 | Plus |
