Clone BO34463 Report

Search the DGRC for BO34463

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:344
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptDNApol-alpha60-RA
Protein status:BO34463.pep: Imported from assembly
Sequenced Size:1633

Clone Sequence Records

BO34463.complete Sequence

1633 bp assembled on 2013-09-16

GenBank Submission: KX798075

> BO34463.complete
GAAGTTATCAGTCGACATGGAGTTTGGTCTGAAGAAACGCGCGAGACATG
AGGTGAAGGTGGAGGTGGCCAGCCTGGAAACCAAGTACCCGCACAACGTC
ATGCTGTACCACTATCCGCCGACGGAGGACGTGCACATAGACGAATTCGA
GGAGCTGGCTCTAGAGCGCTTGCGCCTTCTCCGCGTCCTGGATCGCGCAA
GCACCCGGAACCTGCGCGTGCTCTCAGATGAATGGAAGGAAATCGTGAGT
GCGGACCTGACCCGCGAGGGATTGCGCAGCTATTTAAGGCTCTGCTCCAC
CGGCGGAAGCGCCAAGCACGAGGCGGATATCCAGACCCGCAGGCGGGACT
ATCTTTCGCACTTCATCTTGCGGCTGGCCTACTGCCGCTCCGAGGACCTT
GCGCGCTGGTTCGTGGCCCGCGAAATGGAGCTCTTCCGGTACAAATTCGC
TGCACTTAGCAGCTTCGAGGTGAAGCAGTTCCTTGAGGCCAACGGCTTTG
AGATTCACCCCCTCACCGAGGCCCAGAAGGACGAAGTCAAGGACGGCCTG
TACGAGAGCACGGTCGGACAGAGCGTGGCGAAGATCGAGCTGTTGGACTT
CTACAAGGTGCCCTTCACCCAGGTGCTCGATCTGGTGCGCGGACGTCGCT
GCTTTTTAAAGGCTGGCTACGCCTATGTTAACACCCACGACCTGGTGTCC
CTAGTGGGCACCAAGCAGCAGGACGAGATCGAGCAAGGCCTGCAGGCTGC
TAAGACTATGGTGGAGGATGTAGAAGCCGACGAGCGCATCTCCCGCACAC
TTAAAGCTCTACATAACTCGTATACCGGTAGGGATTACACCGTTTGTCGG
GATGCAGCTGTGCCCATCGAGTCGCTCGATCAGCTCTCCAAGACCTCCAT
GCCGTTGTGTATGCGCATGTGCCACGAGCACATTCGTGCCAACCATCACA
TAAAACATAGCGGCCGAATGCAATACGGCCTGTTTCTCAAAGGAATTGGC
GTGGCACTGGAGGATTCGCTGCGCTTCTGGCGCGAAGAGTTTACCAAGAA
AATGGACGCGGATAAGTTTACACGCAGCTACGAGTACAATATTTACCATA
ACTACGGAAAGAAGGGTTCCATGGTCAACTACACACCCTACTCGTGCGCC
AAGATTATCAAGGATGTGGCGGGGCCGGGCGATTGCCACGGCTGTCCGTA
TAAGAACATGGATCAGGGCTCGTTGAAAACCAAGCTGTCCTCCTATGGCC
TGTCAGCCAGTGCCATCGACGAGGTGATGTTCTTTGTGTCCCGCGGTCAC
TATCAAATTGGATGCGGCAAGTACTTCCAACTTACCCACAATTCACCCGT
CGAGCCGAGCATCAATCACCCCAACAACTACTTCGAGGAGAGCCAGATAG
CGATGGGCAACCGGCAGAAGCGCGCCAATGGTTCTGCTCCGCCCAAGGCC
AGAATCCGTCCAGATATCAAGGGCCATGGGGATCGGTCCATGCTGATGGG
TGACGATGACGATGAGTTGTGGCGAATCGCGGAAACCCAGGAGCGTATCA
TGCAGAGCCAAAAGGACATATCCGAGGCCTTCAATGATGATCTAGATCTT
ACGCAAATCGATTACGCAAGCTTTCTAGACCAT

BO34463.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:54:39
Subject Length Description Subject Range Query Range Score Percent Strand
DNApol-alpha60-RA 1602 CG5553-PA 1..1599 17..1615 7995 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:54:40
Subject Length Description Subject Range Query Range Score Percent Strand
DNApol-alpha60-RA 1753 CG5553-RA 79..1677 17..1615 7995 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:54:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20359909..20361507 1615..17 7995 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:54:38 has no hits.

BO34463.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:46 Download gff for BO34463.complete
Subject Subject Range Query Range Percent Splice Strand
DNApol-alpha60-RA 79..1677 17..1617 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:18 Download gff for BO34463.complete
Subject Subject Range Query Range Percent Splice Strand
DNApol-alpha60-RA 79..1677 17..1617 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:18 Download gff for BO34463.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20359907..20361507 17..1617 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:46 Download gff for BO34463.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20353007..20354607 17..1617 99   Minus

BO34463.pep Sequence

Translation from 16 to 1633

> BO34463.pep
MEFGLKKRARHEVKVEVASLETKYPHNVMLYHYPPTEDVHIDEFEELALE
RLRLLRVLDRASTRNLRVLSDEWKEIVSADLTREGLRSYLRLCSTGGSAK
HEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRYKFAALSSF
EVKQFLEANGFEIHPLTEAQKDEVKDGLYESTVGQSVAKIELLDFYKVPF
TQVLDLVRGRRCFLKAGYAYVNTHDLVSLVGTKQQDEIEQGLQAAKTMVE
DVEADERISRTLKALHNSYTGRDYTVCRDAAVPIESLDQLSKTSMPLCMR
MCHEHIRANHHIKHSGRMQYGLFLKGIGVALEDSLRFWREEFTKKMDADK
FTRSYEYNIYHNYGKKGSMVNYTPYSCAKIIKDVAGPGDCHGCPYKNMDQ
GSLKTKLSSYGLSASAIDEVMFFVSRGHYQIGCGKYFQLTHNSPVEPSIN
HPNNYFEESQIAMGNRQKRANGSAPPKARIRPDIKGHGDRSMLMGDDDDE
LWRIAETQERIMQSQKDISEAFNDDLDLTQIDYASFLDH

BO34463.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
DNApol-alpha60-PA 533 CG5553-PA 1..533 1..533 2803 100 Plus