BO34465.complete Sequence
586 bp assembled on 2013-09-16
GenBank Submission: KX799733
> BO34465.complete
GAAGTTATCAGTCGACATGACCAACTTGATATGCGTTTCCTTAGCTGGAT
TACTCCACGTGATCCAGTTCCTGGCGTTTTATTCCAGAAGTGCCAATACT
CCGGCACCGAAACTACCCTCGCTATTTGTGGGTCTTGCTGCGATGGATAT
TATATGGGACAATTGCTTCGTTCCCCGGAAACTTCAAAAGAGGTCGGCTG
TGATCAGGTGGATATACGAATTGATAGTGTCACACTTGCTATTGGGGCTT
GTCCAGGTGTTTTGGAAGCCAGTGGATAATATATGTGTCATCCTGATGAG
ACTCATAATACTCGGCACTGGCATCGTCTCGGAGACCAACTATGAAAACT
ACGAAAGCTACTGGGTGGGCTTTCTTACCGTGCCGTTGTCCCTTCTGATC
CTAGCAATAGCCGGCCAAGCCACTGACCATTTCTCCGTGTTACGCGCTTA
CAAAATGCAAAATGTGGGGGCCTTAAAGTATCCGACGAAGAGGCTGCCGC
ATCGTTCCGATTCTGAGAGAGCACAGGGATCAGGCACGCCGACGGCGTCA
GCAATAAAGGGAAACTTGGCAAGCTTTCTAGACCAT
BO34465.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:54:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43115-RA | 555 | CG43115-PA | 1..552 | 17..568 | 2745 | 99.8 | Plus |
| CG43136-RA | 579 | CG43136-PA | 1..451 | 17..467 | 1970 | 95.8 | Plus |
| CG43136-RA | 579 | CG43136-PA | 500..579 | 480..557 | 305 | 95 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:54:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43115-RA | 688 | CG43115-RA | 75..626 | 17..568 | 2745 | 99.8 | Plus |
| CG43136-RA | 704 | CG43136-RA | 75..525 | 17..467 | 1970 | 95.8 | Plus |
| CG43136-RA | 704 | CG43136-RA | 574..664 | 480..568 | 345 | 94.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6065791..6066342 | 568..17 | 2745 | 99.8 | Minus |
| X | 23542271 | X | 5853835..5854285 | 17..467 | 1970 | 95.8 | Plus |
| 2L | 23513712 | 2L | 6972258..6972395 | 32..174 | 410 | 87.4 | Plus |
| 2L | 23513712 | 2L | 6972418..6972605 | 218..402 | 380 | 81.4 | Plus |
| X | 23542271 | X | 5854334..5854424 | 480..568 | 345 | 94.5 | Plus |
| 2L | 23513712 | 2L | 6972732..6972805 | 495..568 | 235 | 87.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:54:42 has no hits.
BO34465.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:48 Download gff for
BO34465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43115-RA | 75..626 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:20 Download gff for
BO34465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43115-RA | 75..626 | 17..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:20 Download gff for
BO34465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6065788..6066342 | 17..570 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:48 Download gff for
BO34465.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5959821..5960375 | 17..570 | 99 | | Minus |
BO34465.pep Sequence
Translation from 16 to 586
> BO34465.pep
MTNLICVSLAGLLHVIQFLAFYSRSANTPAPKLPSLFVGLAAMDIIWDNC
FVPRKLQKRSAVIRWIYELIVSHLLLGLVQVFWKPVDNICVILMRLIILG
TGIVSETNYENYESYWVGFLTVPLSLLILAIAGQATDHFSVLRAYKMQNV
GALKYPTKRLPHRSDSERAQGSGTPTASAIKGNLASFLDH
BO34465.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43115-PA | 184 | CG43115-PA | 1..184 | 1..184 | 946 | 100 | Plus |
| CG43136-PA | 192 | CG43136-PA | 1..172 | 1..160 | 719 | 84.9 | Plus |
