BO34472.complete Sequence
490 bp assembled on 2013-09-16
GenBank Submission: KX795373
> BO34472.complete
GAAGTTATCAGTCGACATGGCGCAAAACTCAAAGTTAACAATCTATCTGT
TCCTAGTCGCAATTTCCGTGGGCTCCAGCCTGTCCTACGATGTGCCCAAG
GCCACCGTCAAGGTCAACTCACCGAAGGGATTCGAAGTCTCCATTCCGGA
TGAGCCAGGCATTTCCCTATTCGCTTTTCACGGCAAGGTCAACGAGGAAA
TGGACGATCTGAGCGATCAGACCTGGGCCGCCGATGTGGTCAGTTCACGC
AATGGACGCTGGACTTATCGCAACCGGAACCATCAGCTTAGACCCGGAGA
TGTTCTGTACTATTGGACAACGGCGCGTTACCATGGAGTCGACTATCACA
ACTACAACCAGAGGTATGTGGTTGGGCAGGGGGATTCCCAGAGAATCGAT
GTCAACGGCTCCAACGGCGGTCGCCAGCCGATTGTGGCCAACGGCCATAA
TACGTTCAATATATATGTACAAGCAAGCTTTCTAGACCAT
BO34472.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:54:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GNBP-like3-RA | 459 | CG13422-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:54:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GNBP-like3-RA | 515 | CG13422-RA | 18..478 | 12..472 | 2290 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:54:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20526328..20526788 | 12..472 | 2290 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:54:33 has no hits.
BO34472.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-16 11:51:43 Download gff for
BO34472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13422-RA | 39..494 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:17 Download gff for
BO34472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GNBP-like3-RA | 23..478 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:17 Download gff for
BO34472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20526333..20526788 | 17..474 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-16 11:51:43 Download gff for
BO34472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16413838..16414293 | 17..474 | 99 | | Plus |
BO34472.pep Sequence
Translation from 16 to 490
> BO34472.pep
MAQNSKLTIYLFLVAISVGSSLSYDVPKATVKVNSPKGFEVSIPDEPGIS
LFAFHGKVNEEMDDLSDQTWAADVVSSRNGRWTYRNRNHQLRPGDVLYYW
TTARYHGVDYHNYNQRYVVGQGDSQRIDVNGSNGGRQPIVANGHNTFNIY
VQASFLDH
BO34472.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:43:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GNBP-like3-PA | 152 | CG13422-PA | 1..152 | 1..152 | 814 | 100 | Plus |
GNBP3-PA | 490 | CG5008-PA | 26..121 | 24..119 | 317 | 59.4 | Plus |
CG12780-PA | 100 | CG12780-PA | 4..96 | 24..115 | 316 | 61.3 | Plus |
CG30148-PB | 124 | CG30148-PB | 4..121 | 7..124 | 284 | 44.1 | Plus |
CG30148-PA | 124 | CG30148-PA | 4..121 | 7..124 | 284 | 44.1 | Plus |