BO34502.complete Sequence
418 bp assembled on 2013-10-29
GenBank Submission: KX798756
> BO34502.complete
GAAGTTATCAGTCGACATGCAGTACAATCAGCAGCCGGCGGGAGCGCCGG
GCTATCCCCACCAGATGCCCCCACCGAGCTATGAGCAGGTGGTGCACGTG
CAGGCGCCAGTTCGGGTGGTTCACCACACGACAGCACCTCCGCCCGTGGT
GATCATACAACATCAAGCTGTATTGCCGGTGGGTCCGGATCCCACCTTCA
TCACCTGCCCGCATTGCCATGTCCAGAAACTGACCCGCGTGGAGTACTCG
CCCAGTGTGAAAACTCACTGCATGGCCGCCATTCTATGCATCGTTGGCCT
CTGGTGTTGTGCCTGCCTGCCTTACTGCGCCACCAGCTGCATGAACGCCA
ATCACTTTTGCGGCAATTGCAATAAGTTCGTCGGCGTCTACAACAGCGAT
GCAAGCTTTCTAGACCAT
BO34502.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:12:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30273-RB | 387 | CG30273-PB | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:12:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30273-RB | 1234 | CG30273-RB | 28..411 | 17..400 | 1920 | 100 | Plus |
CG30269-RB | 1234 | CG30269-RB | 28..411 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22667182..22667326 | 17..161 | 725 | 100 | Plus |
2R | 25286936 | 2R | 22667383..22667518 | 162..297 | 680 | 100 | Plus |
2R | 25286936 | 2R | 22667589..22667692 | 297..400 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:12:53 has no hits.
BO34502.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:33 Download gff for
BO34502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30273-RA | 28..411 | 17..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:32 Download gff for
BO34502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30269-RB | 28..411 | 17..402 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:32 Download gff for
BO34502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22667182..22667326 | 17..161 | 100 | -> | Plus |
2R | 22667383..22667518 | 162..297 | 100 | -> | Plus |
2R | 22667590..22667692 | 298..402 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:33 Download gff for
BO34502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18554687..18554831 | 17..161 | 100 | -> | Plus |
arm_2R | 18554888..18555023 | 162..297 | 100 | -> | Plus |
arm_2R | 18555095..18555197 | 298..402 | 98 | | Plus |
BO34502.pep Sequence
Translation from 16 to 418
> BO34502.pep
MQYNQQPAGAPGYPHQMPPPSYEQVVHVQAPVRVVHHTTAPPPVVIIQHQ
AVLPVGPDPTFITCPHCHVQKLTRVEYSPSVKTHCMAAILCIVGLWCCAC
LPYCATSCMNANHFCGNCNKFVGVYNSDASFLDH
BO34502.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30273-PB | 128 | CG30273-PB | 1..128 | 1..128 | 737 | 100 | Plus |
CG30269-PB | 144 | CG30269-PB | 23..142 | 11..126 | 286 | 42.9 | Plus |
CG30269-PA | 144 | CG30269-PA | 23..142 | 11..126 | 286 | 42.9 | Plus |
CG13510-PC | 129 | CG13510-PC | 4..129 | 16..127 | 263 | 41.3 | Plus |
CG13510-PB | 129 | CG13510-PB | 4..129 | 16..127 | 263 | 41.3 | Plus |