Clone BO34503 Report

Search the DGRC for BO34503

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:345
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptDrip-RC
Protein status:BO34503.pep: Imported from assembly
Sequenced Size:763

Clone Sequence Records

BO34503.complete Sequence

763 bp assembled on 2013-10-29

GenBank Submission: KX793768

> BO34503.complete
GAAGTTATCAGTCGACATGGTTTTTGAAATGTCGAAATTCGTTGGCGTTG
CCGACATAACCGAGAACAAGAAAATCTGGCGCATGCTGCTCGGCGAACTG
GTGGGCACATTTTTCTTGATCTTCGTCGGCGTTGGCAGCACGACGAGCGG
AAGTGTACCACAAATCGCATTCACCTTTGGCTTGACGGTGGCCACCATCG
CCCAGGGCTTGGGCCACCTCAGTGGCTGTCACATTAATCCGGCGGTCACC
CTTGGATTCCTGATCGTTGGTGAGATCAGCATTCTGAAGGCTGCCTTCTA
CATCATCGTCCAATGCGTGGGCGCCATTGCTGGAGCGGCTGTGATAAAGG
TGGCACTCGATGGAGTGGCTGGTGGCGACCTGGGAGTATCCTCCTTTGAT
CCCTCCCTGAACTGTGCACAGGCGGTGCTGATCGAAGCGCTGATCACCTT
TATTTTGGTTTTCGTGGTCAAGGCTGTTTCGGATCCTGGACGCCAGGATA
TCAAGGGATCAGCGCCACTGGCTGTTGGTTTGGCCATCGCCGCTGGCCAT
TTGTGTGCAATCAAACTGAGCGGTGCCAGCATGAATCCCGCCCGGTCCTT
TGGTCCCGCCGTAGTGCAGGGCGTCTGGACCTATCACTGGGTTTACTGGG
TGGGTCCCATTGCCGGCGGCCTGTTGGCCGGAATCATCTACAGATTAATC
TTCAAGGTACGCAAGGGCGATGATGAGACCGACTCGTACGACTTCGCAAG
CTTTCTAGACCAT

BO34503.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:13:00
Subject Length Description Subject Range Query Range Score Percent Strand
Drip-RC 732 CG9023-PC 1..729 17..745 3645 100 Plus
Drip-RD 729 CG9023-PD 6..726 25..745 3605 100 Plus
Drip-RB 738 CG9023-PB 16..735 26..745 3600 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
Drip-RC 1514 CG9023-RC 353..1081 17..745 3645 100 Plus
Drip-RD 1288 CG9023-RD 135..855 25..745 3605 100 Plus
Drip-RE 1180 CG9023-RE 28..747 26..745 3600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11412632..11412988 559..203 1785 100 Minus
2R 25286936 2R 11412389..11412574 745..560 930 100 Minus
2R 25286936 2R 11421257..11421437 206..26 905 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:13:00 has no hits.

BO34503.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:35 Download gff for BO34503.complete
Subject Subject Range Query Range Percent Splice Strand
Drip-RC 353..1081 17..747 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:34 Download gff for BO34503.complete
Subject Subject Range Query Range Percent Splice Strand
Drip-RC 353..1081 17..747 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:34 Download gff for BO34503.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11412632..11412985 206..559 100 <- Minus
2R 11412387..11412574 560..747 98 <- Minus
2R 11421258..11421442 21..205 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:35 Download gff for BO34503.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7299892..7300079 560..747 98 <- Minus
arm_2R 7300137..7300490 206..559 100 <- Minus
arm_2R 7308763..7308947 21..205 98   Minus

BO34503.pep Sequence

Translation from 16 to 763

> BO34503.pep
MVFEMSKFVGVADITENKKIWRMLLGELVGTFFLIFVGVGSTTSGSVPQI
AFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQC
VGAIAGAAVIKVALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFV
VKAVSDPGRQDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVV
QGVWTYHWVYWVGPIAGGLLAGIIYRLIFKVRKGDDETDSYDFASFLDH

BO34503.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
Drip-PC 243 CG9023-PC 1..243 1..243 1235 100 Plus
Drip-PD 242 CG9023-PD 3..242 4..243 1220 100 Plus
Drip-PB 245 CG9023-PB 6..245 4..243 1220 100 Plus
Drip-PA 245 CG9023-PA 6..245 4..243 1220 100 Plus
Drip-PE 239 CG9023-PE 1..239 5..243 1215 100 Plus