BO34504.complete Sequence
724 bp assembled on 2013-10-29
GenBank Submission: KX797421
> BO34504.complete
GAAGTTATCAGTCGACATGGTGGAGGCAGCTCTTCAAACTGATCCAGAAA
ATGAAGAGCTATTAAAACTCAGAAGTGATCTTGACGAAGTTATTACCCTT
ACTCGTGATTTGATACAAACTCAACTGGAAGAACAAAATAAATCTTCATA
TGTGGAGCCATCATCAACCAAAAGAGATTCGTCCAACTACTTCGACGAAA
TAGAAGCAGCTCTATTAGAAGCAGAAAAATTAGTTTCAGCTGCTAAGATT
TGGAAAAAAGGAGACAAGTGTCAAGCTAAATGGAAGGAGGATCGTCAGTA
CTACGATGCAACTATTGAAGATATATCAAGTACAGGAGAAGTTAATGTAA
TATTCGATGCCTATCAAAATCGATCTACGACCCACGTCAATGAGTTGCGT
GAACGTACTATTCGCAACGAAGTTTTTCCGTCAAACAAGCGGCACAGGCC
CAATCAAAAAGAATATTTAAAAAAACGTAAGCAAAAAAAGCAACAGCGCT
TCAAGGACTTGGAAGAGGAACGTGAATCAGACAAGAACAAATGGCTTAAT
TTTAACAACAAAAACCAAAAAAAAAACGGAATGAAAGCAAGAAGTATATT
TGCGTCTCCGGATAATGTAAGCGGCAGAGTAGGAGTCGGCACTTGTGGAA
CTGCAGGAAAGGGCATGACAGATTTTACTGTGGGTGAAAAATATAGAAAA
GGTCTTGCAAGCTTTCTAGACCAT
BO34504.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:13:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17454-RB | 693 | CG17454-PB | 1..690 | 17..706 | 3450 | 100 | Plus |
| CG17454-RA | 732 | CG17454-PA | 43..729 | 20..706 | 3435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17454-RB | 1163 | CG17454-RB | 425..1114 | 17..706 | 3450 | 100 | Plus |
| CG17454-RA | 880 | CG17454-RA | 145..831 | 20..706 | 3435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 23715901..23716321 | 19..439 | 2105 | 100 | Plus |
| 3L | 28110227 | 3L | 23716369..23716640 | 435..706 | 1345 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:13:04 has no hits.
BO34504.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:45:35 Download gff for
BO34504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17454-RB | 425..1114 | 17..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:43:36 Download gff for
BO34504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17454-RB | 425..1114 | 17..708 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:43:36 Download gff for
BO34504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 23715900..23716320 | 17..438 | 99 | -> | Plus |
| 3L | 23716373..23716640 | 439..708 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:45:35 Download gff for
BO34504.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 23709000..23709420 | 17..438 | 99 | -> | Plus |
| arm_3L | 23709473..23709740 | 439..708 | 99 | | Plus |
BO34504.pep Sequence
Translation from 16 to 724
> BO34504.pep
MVEAALQTDPENEELLKLRSDLDEVITLTRDLIQTQLEEQNKSSYVEPSS
TKRDSSNYFDEIEAALLEAEKLVSAAKIWKKGDKCQAKWKEDRQYYDATI
EDISSTGEVNVIFDAYQNRSTTHVNELRERTIRNEVFPSNKRHRPNQKEY
LKKRKQKKQQRFKDLEEERESDKNKWLNFNNKNQKKNGMKARSIFASPDN
VSGRVGVGTCGTAGKGMTDFTVGEKYRKGLASFLDH
BO34504.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17454-PB | 230 | CG17454-PB | 1..230 | 1..230 | 1189 | 100 | Plus |
| CG17454-PA | 243 | CG17454-PA | 15..243 | 2..230 | 1184 | 100 | Plus |
